Gene omics information

Query gene ID Contig11708_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9699.4Contig11708_atContig11708--1e-1At4g19230CYP707A1S.X.H.G.
0.4356.4Contig4250_atContig4250--2e-1At1g76590zinc-binding family proteinS.X.H.G.
0.3849.5Contig1315_s_atContig1315--8e-14At3g16240DELTA-TIPS.X.H.G.
0.3138.6Contig1352_atContig1352--6e-7At3g47810MAG1 (MAIGO 1)S.X.H.G.
0.3138.6Contig14225_atContig14225--2e+0At1g34020transporter-relatedS.X.H.G.
0.3037.0Contig11867_s_atContig11867--4e-1At1g03790SOM (SOMNUS)S.X.H.G.
0.2732.1Contig20821_atContig20821--4e-1At4g21902unknown proteinS.X.H.G.
0.2732.1Contig12244_atContig12244--5e-1At1g12663-S.X.H.G.
0.2326.1Contig9109_atContig9109--1e+0Atmg00070-S.X.H.G.
0.2224.2Contig17029_atContig17029--5e+0At3g61827unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.999.9GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
35.399.9GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
24.699.8GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
11.499.3GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
9.098.9GSM419972Lemma_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
9.098.9GSM440957Control lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
8.998.9GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.998.7GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
6.698.2GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
6.298.0GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-342HVSMEb0004F22r2_atHVSMEb0004F22r2--1e-6At1g64940CYP89A6C.G.S.X.
0.017e-238Contig7739_atContig7739--9e-7At4g39660AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2)C.G.S.X.
0.023e-136HZ40A08r_atHZ40A08r--4e+0At5g52965unknown proteinC.G.S.X.
0.023e-136Contig20359_atContig20359--2e+0At4g26110NAP1C.G.S.X.
0.013e-136Contig16357_atContig16357--4e-5At2g45530zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.011e+034Contig5215_atContig5215--2e-4At2g01490phytanoyl-CoA dioxygenase (PhyH) family proteinC.G.S.X.
0.021e+034HVSMEc0006O07r2_atHVSMEc0006O07r2--4e+0At5g51812unknown proteinC.G.S.X.
0.021e+034Contig24244_atContig24244--3e-1At1g69960PP2A (SERINE/THREONINE PROTEIN PHOSPHATASE 2A)C.G.S.X.
0.021e+034Contig13825_atContig13825--2e-1At2g32440KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-138Arabidopsis thalianaAt4g19230827663CYP707A1Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.---C.G.S.X.
0.032e-138Glycine maxGma.16437.1.S1_atCD398046--9e-11At3g19270CYP707A4C.G.S.X.
0.235e-83309Oryza sativaOs02g0703600AK067007.1-Cytochrome P450 90C1 (EC 1.14.-.-) (ROTUNDIFOLIA3)2e-2At4g19230CYP707A1C.G.S.X.
0.091e-552Populus trichocarpaPtpAffx.223327.1.S1_atpmrna41264hypothetical protein-1e-39At4g19230CYP707A1C.G.S.X.
0.412e-108393Triticum aestivumTa.22981.3.S1_a_atBJ291883--1e-6At4g19230CYP707A1C.G.S.X.
0.027e-134Vitis vinifera1621989_atCD006576--3e-21At4g19230CYP707A1C.G.S.X.
0.252e-75282Zea maysZm.7780.1.A1_atCD433445hypothetical protein LOC100274595-1e-7At4g19230CYP707A1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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