Gene omics information

Query gene ID Contig11705_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4458.9Contig11705_atContig11705--3e-29At2g07050CAS1 (cycloartenol synthase 1)S.X.H.G.
0.3647.1Contig10126_atContig10126--9e-2At4g30067LCR63 (Low-molecular-weight cysteine-rich 63)S.X.H.G.
0.3342.6Contig12388_atContig12388--2e-2At1g77980AGL66 (AGAMOUS-LIKE 66)S.X.H.G.
0.1412.9Contig7548_atContig7548--5e-35At2g19830SNF7.2S.X.H.G.
0.1311.6Contig12389_s_atContig12389--1e-2At1g77980AGL66 (AGAMOUS-LIKE 66)S.X.H.G.
0.032.6HS04E01u_s_atHS04E01u--1e+0At1g17970zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.798.9GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.198.7GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.198.7GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.198.4GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.697.7GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stress
5.197.3GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.197.3GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
5.097.2GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.097.2GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.796.9GSM1611487% SWC rep3GSE6990Barley drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-344Contig13511_atContig13511--1e-2At3g45130LAS1C.G.S.X.
0.016e-136Contig23368_atContig23368--1e+0At4g14780protein kinase, putativeC.G.S.X.
0.016e-136HB17B06r_atHB17B06r--3e-1At5g43750unknown proteinC.G.S.X.
0.016e-136Contig10297_atContig10297--7e+0At5g18390pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.012e+034Contig7996_atContig7996--8e-10At2g42750DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.012e+034Contig15134_atContig15134--2e+0At5g42635glycine-rich proteinC.G.S.X.
0.012e+034Contig13514_atContig13514--2e+0At3g49690MYB84 (MYB DOMAIN PROTEIN 84)C.G.S.X.
0.012e+034Contig11449_atContig11449--9e-29At3g57330ACA11 (autoinhibited Ca2+-ATPase 11)C.G.S.X.
0.012e+034HVSMEl0010A03r2_s_atHVSMEl0010A03r2--1e+1At1g72130proton-dependent oligopeptide transport (POT) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.263e-29131Arabidopsis thalianaAt2g07050815275CAS1 (cycloartenol synthase 1)Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.---C.G.S.X.
0.181e-759Glycine maxGma.6863.1.S1_atBQ628209--2e-35At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
0.6401782Oryza sativaOs02g0139700AK121211.1-Cycloartenol synthase (EC 5.4.99.8)2e-24At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
0.112e-965Populus trichocarpaPtpAffx.120914.1.A1_atCV260779--6e-25At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
0.8102682Triticum aestivumTa.9982.1.S1_atCA599875--9e-32At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
0.127e-1581Vitis vinifera1618177_atCF511456hypothetical protein LOC100243389-9e-40At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
0.6101667Zea maysZm.5697.2.S1_atAI834433--5e-25At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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