Gene omics information

Query gene ID Contig11552_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.8Contig11552_atContig11552--1e-13At2g35700ERF38 (ERF FAMILY PROTEIN 38)S.X.H.G.
0.7388.7Contig8487_atContig8487--8e-6At1g28490SYP61 (SYNTAXIN OF PLANTS 61)S.X.H.G.
0.5572.0Contig9746_atContig9746--6e+0At4g24990ATGP4S.X.H.G.
0.5066.9Contig20641_atContig20641--9e-1At5g01380transcription factorS.X.H.G.
0.4762.2HF11O19r_atHF11O19r--8e-5At3g25140QUA1 (QUASIMODO 1)S.X.H.G.
0.3342.6HV09F14u_atHV09F14u--3e-1At1g71440PFI (PFIFFERLING)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
61.2100.0GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
58.5100.0GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
30.599.9GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
20.599.7GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.798.3GSM261024ABA-Early-rep1GSE10328ABA experiment
6.298.0GSM688933 h salt stressed replicate 2GSE3097Barley1 salinity stress study
6.198.0GSM261028ABA-Late-rep2GSE10328ABA experiment
5.397.4GSM261025ABA-Early-rep2GSE10328ABA experiment
5.297.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.596.7GSM6890227 h control replicate 2GSE3097Barley1 salinity stress study
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.168e-26117Contig20485_atContig20485--3e-1At4g25470CBF2 (C-REPEAT/DRE BINDING FACTOR 2)C.G.S.X.
0.081e-1893Contig6987_atContig6987--6e-17At1g46768RAP2.1 (related to AP2 1)C.G.S.X.
0.052e-1479Contig13523_atContig13523--2e-3At1g15360SHN1 (SHINE 1)C.G.S.X.
0.053e-1375AF442489_atAF442489--2e+0At5g44005unknown proteinC.G.S.X.
0.054e-342Contig4317_atContig4317--2e-1At1g36060AP2 domain-containing transcription factor, putativeC.G.S.X.
0.024e-342Contig5888_atContig5888--7e-4At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)C.G.S.X.
0.024e-342Contig10941_atContig10941--2e-1At3g48340cysteine-type endopeptidase/ cysteine-type peptidaseC.G.S.X.
0.044e-342Contig18750_atContig18750--2e+0At2g33710AP2 domain-containing transcription factor family proteinC.G.S.X.
0.024e-342Contig13545_atContig13545--1e-20At2g38730peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-1377Arabidopsis thalianaAt2g35700818139ERF38 (ERF FAMILY PROTEIN 38)encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Thought to be involved in secondary cell wall metabolism.---C.G.S.X.
0.141e-1171Glycine maxGmaAffx.17408.1.A1_atBE805951--2e-5At1g63030ddf2 (DWARF AND DELAYED FLOWERING 2)C.G.S.X.
0.373e-115416Oryza sativaOs02g0657000AY346094.1-AP2 domain-containing protein Rap2111e-1At2g35700ERF38 (ERF FAMILY PROTEIN 38)C.G.S.X.
0.105e-859Populus trichocarpaPtp.6803.1.S1_atDN499713--8e-9At1g77200AP2 domain-containing transcription factor TINY, putativeC.G.S.X.
0.256e-56218Triticum aestivumTaAffx.86939.1.S1_atCA598527--4e-3At2g35700ERF38 (ERF FAMILY PROTEIN 38)C.G.S.X.
0.036e-134Vitis vinifera1611583_atCF405989hypothetical protein LOC100250412-3e-5At5g52020AP2 domain-containing proteinC.G.S.X.
0.228e-66250Zea maysZm.9418.1.S1_atAF493799.1DREB-like protein-4e-2At2g35700ERF38 (ERF FAMILY PROTEIN 38)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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