Gene omics information

Query gene ID Contig11540_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7388.7Contig11540_s_atContig11540--3e+0At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinS.X.H.G.
0.7388.7Contig11542_atContig11542--2e+0At3g19880F-box family proteinS.X.H.G.
0.4458.9Contig11541_atContig11541--3e-1At2g05540glycine-rich proteinS.X.H.G.
0.4356.4HVSMEf0019G08r2_s_atHVSMEf0019G08r2--5e-2At4g03940unknown proteinS.X.H.G.
0.3647.1Contig19296_atContig19296--2e+0At4g04760sugar transporter family proteinS.X.H.G.
0.3240.3Contig18313_atContig18313--3e-8At1g10760SEX1 (STARCH EXCESS 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.498.8GSM261059Xantha b-12 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.298.7GSM261060Xantha b-12 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.698.6GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.298.5GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.898.3GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.598.2GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.498.1GSM261075Albina e-16 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.997.9GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.897.8GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.897.8GSM261062Xantha s-46 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.687e-157551Contig11540_atContig11540--3e+0At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinC.G.S.X.
0.398e-95345Contig11541_atContig11541--3e-1At2g05540glycine-rich proteinC.G.S.X.
0.041e-136HD04N17u_atHD04N17u--3e-1At1g09575unknown proteinC.G.S.X.
0.022e+032Contig14918_atContig14918--7e-3At5g64960CDKC2 (Cyclin dependent kinase group C 2)C.G.S.X.
0.022e+032Contig10474_atContig10474--2e-16At1g80950phospholipid/glycerol acyltransferase family proteinC.G.S.X.
0.026e+030Contig6523_atContig6523--1e-1At1g29840esterase/lipase/thioesterase family proteinC.G.S.X.
0.036e+030Contig17055_atContig17055--2e-6At5g66350SHI (SHORT INTERNODES)C.G.S.X.
0.026e+030Contig16722_atContig16722--8e-15At3g24210ankyrin repeat family proteinC.G.S.X.
0.046e+030HO01J13S_atHO01J13S--2e-1At1g78070-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+032Arabidopsis thalianaAt3g44190823541pyridine nucleotide-disulphide oxidoreductase family proteinF:electron carrier activity, oxidoreductase activity, FAD binding;P:unknown;C:unknown;BOFAMP---C.G.S.X.
0.063e-136Glycine maxGmaAffx.92360.1.S1_atCF808085--5e-1At1g34000OHP2 (ONE-HELIX PROTEIN 2)C.G.S.X.
0.027e+032Oryza sativaOs05g05039009633.m03979--2e-1At3g49820unknown proteinC.G.S.X.
0.035e+032Populus trichocarpaPtpAffx.73770.1.S1_atDN496814--2e-1At4g01420CBL5 (CALCINEURIN B-LIKE PROTEIN 5)C.G.S.X.
0.563e-34145Triticum aestivumTa.23904.1.S1_atCA735690--2e-1At1g53620unknown proteinC.G.S.X.
0.034e+030Vitis vinifera1618287_atCD802116hypothetical protein LOC100241989-7e-2At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.036e+030Zea maysZmAffx.1449.1.S1_at40794996-6--1e+0At3g32090transcription factor-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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