Gene omics information

Query gene ID Contig11464_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.1Contig11464_atContig11464--6e-20At1g55740AtSIP1 (Arabidopsis thaliana seed imbibition 1)S.X.H.G.
0.9198.1Contig4175_atContig4175--1e-19At3g07100protein transport protein Sec24, putativeS.X.H.G.
0.8092.5Contig4760_s_atContig4760--1e+0At4g38700disease resistance-responsive family proteinS.X.H.G.
0.7388.7Contig5297_atContig5297--4e-16At1g64550ATGCN3S.X.H.G.
0.6784.7Contig5117_atContig5117--8e-2At5g60500undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family proteinS.X.H.G.
0.6178.7Contig6995_atContig6995--2e-8At5g57270unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.399.8GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
22.099.8GSM261058Xantha b-12 Cotrol rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
20.099.7GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
17.399.6GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
16.799.6GSM261057Xantha b-12 Cotrol rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
16.399.6GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
13.699.5GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seeds
13.299.4GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
11.299.2GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
10.399.1GSM282029Malting_day1_Merit_rep3GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.083e-1479Contig4459_atContig4459--4e-7At3g57520AtSIP2 (Arabidopsis thaliana seed imbibition 2)C.G.S.X.
0.043e-550Contig26196_atContig26196--4e-1At1g08570ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4)C.G.S.X.
0.026e-342Contig6104_atContig6104--1e-3At3g57520AtSIP2 (Arabidopsis thaliana seed imbibition 2)C.G.S.X.
0.013e-240Contig11623_atContig11623--2e-1At5g11330monooxygenase family proteinC.G.S.X.
0.011e-138Contig6776_s_atContig6776--2e-3At1g20850XCP2 (xylem cysteine peptidase 2)C.G.S.X.
0.021e-138Contig11540_s_atContig11540--3e+0At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinC.G.S.X.
0.021e-138Contig11540_atContig11540--3e+0At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinC.G.S.X.
0.011e-138Contig8658_atContig8658--1e-1At5g46890protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.014e-136Contig14610_atContig14610--5e-2At2g44060late embryogenesis abundant family protein / LEA family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.106e-2099Arabidopsis thalianaAt1g55740842023AtSIP1 (Arabidopsis thaliana seed imbibition 1)F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:unknown;C:cellular_component unknown;PFBAO---C.G.S.X.
0.091e-1275Glycine maxGma.12012.1.S1_s_atBU548282--1e-14At3g57520AtSIP2 (Arabidopsis thaliana seed imbibition 2)C.G.S.X.
0.474e-155549Oryza sativaOs08g0495800AK067229.1-Raffinose synthase family protein3e-26At1g55740AtSIP1 (Arabidopsis thaliana seed imbibition 1)C.G.S.X.
0.153e-1687Populus trichocarpaPtpAffx.216301.1.S1_s_atpmrna30987hypothetical protein-3e-35At1g55740AtSIP1 (Arabidopsis thaliana seed imbibition 1)C.G.S.X.
0.443e-179628Triticum aestivumTa.26092.1.S1_atCD452594--1e+0At1g49405integral membrane protein, putativeC.G.S.X.
0.081e-654Vitis vinifera1608995_atBQ796616hypothetical protein LOC100248608-2e-92At3g57520AtSIP2 (Arabidopsis thaliana seed imbibition 2)C.G.S.X.
0.271e-47190Zea maysZm.19172.1.A1_atCO528850hypothetical protein LOC100274312-7e-3At1g55740AtSIP1 (Arabidopsis thaliana seed imbibition 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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