CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig11434_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 92.5 Contig11434_at Contig11434 - - 3e-20 At3g20290 ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) S.X. H.G.
0.91 98.1 Contig11436_at Contig11436 - - 5e-23 At2g03270 DNA-binding protein, putative S.X. H.G.
0.50 66.9 Contig8287_at Contig8287 - - 4e-65 At2g16440 DNA replication licensing factor, putative S.X. H.G.
0.40 53.1 Contig5782_at Contig5782 - - 9e-3 At5g63740 zinc finger protein-related S.X. H.G.
0.20 21.1 Contig3527_at Contig3527 - - 4e-169 At5g19990 RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A) S.X. H.G.
0.11 9.4 Contig23462_at Contig23462 - - 5e+0 At5g43770 proline-rich family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
22.1 99.8 GSM215732 gibberellin plus Yariv-reagent treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
14.6 99.5 GSM215727 Control (DMSO) treatment rep1 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
14.0 99.5 GSM215729 gibberellin plus Yariv-reagent treatment rep1 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
13.8 99.5 GSM215728 gibberellin treatment rep1 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
13.3 99.4 GSM215730 Control (DMSO) treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
7.2 98.5 GSM215731 gibberellin treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
6.4 98.1 GSM213441 Barley seeds control in Hoagland solution for 12hr GSE8618 P. aeruginosa virulent factor to barley
5.6 97.7 GSM261079 Albina e-16 Hardened rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.4 97.5 GSM213443 Barley seeds with P. aeruginosa PA5021 mutant for 12hr GSE8618 P. aeruginosa virulent factor to barley
4.5 96.7 GSM261067 Xantha s-46 Hardened rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.47 8e-149 525 Contig11433_s_at Contig11433 - - 4e-2 At3g06730 thioredoxin family protein C.G. S.X.
0.16 4e-30 131 HW06H20u_at HW06H20u - - 4e-3 At3g20290 ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) C.G. S.X.
0.03 2e-1 36 Contig22908_at Contig22908 - - 3e+0 At3g02290 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 2e-1 36 Contig22860_at Contig22860 - - 4e-1 At1g67030 ZFP6 (ZINC FINGER PROTEIN 6) C.G. S.X.
0.02 8e-1 34 Contig11969_at Contig11969 - - 2e-6 At5g04330 cytochrome P450, putative / ferulate-5-hydroxylase, putative C.G. S.X.
0.03 3e+0 32 HF03K01r_at HF03K01r - - 3e-1 At5g49410 unknown protein C.G. S.X.
0.01 3e+0 32 Contig2704_s_at Contig2704 - - 9e-1 At5g47175 LCR3 (Low-molecular-weight cysteine-rich 3) C.G. S.X.
0.01 3e+0 32 Contig12296_at Contig12296 - - 2e-2 At4g29130 HXK1 (HEXOKINASE 1) C.G. S.X.
0.03 3e+0 32 Contig10252_s_at Contig10252 - - 3e+0 At5g65000 nucleotide-sugar transporter family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 3e-20 99 Arabidopsis thaliana At3g20290 821573 ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520). - - - C.G. S.X.
0.16 2e-6 54 Glycine max GmaAffx.86394.1.S1_at BE057769 - - 4e-19 At3g20290 ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) C.G. S.X.
0.35 6e-128 458 Oryza sativa Os02g0158100 AK073124.1 - EH-domain containing protein 4 (FKSG7 protein)(Hepatocellular carcinoma-associated protein 10/11) 5e-64 At3g20290 ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) C.G. S.X.
0.45 3e-18 93 Populus trichocarpa PtpAffx.222087.1.S1_at pmrna39298 hypothetical protein - 2e-44 At3g20290 ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) C.G. S.X.
0.74 0 769 Triticum aestivum Ta.10232.1.S1_a_at BQ802669 - - 2e-8 At3g20290 ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) C.G. S.X.
0.28 1e-29 129 Vitis vinifera 1619529_at BQ798281 hypothetical protein LOC100241890 - 5e-47 At3g20290 ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) C.G. S.X.
0.47 1e-73 276 Zea mays Zm.5115.1.A1_at AI600917 hypothetical protein LOC100272658 - 2e-46 At3g20290 ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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