Gene omics information

Query gene ID Contig1140_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4458.9Contig1140_atContig1140--3e-17At1g07790HTB1S.X.H.G.
0.2935.5Contig8615_atContig8615--2e+0At5g24870zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.2122.6Contig21112_atContig21112--6e+0At5g23360GRAM domain-containing protein / ABA-responsive protein-relatedS.X.H.G.
0.1919.6Contig13884_atContig13884--3e-5At2g37510RNA-binding protein, putativeS.X.H.G.
0.108.4HVSMEl0002M03r2_x_atHVSMEl0002M03r2--4e+1At5g55630ATKCO1S.X.H.G.
0.097.4Contig24376_atContig24376--6e+0At5g59950RNA and export factor-binding protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.899.6GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
13.699.5GSM688903 h control replicate 2GSE3097Barley1 salinity stress study
11.599.3GSM6890227 h control replicate 2GSE3097Barley1 salinity stress study
11.099.2GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
9.599.0GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
9.198.9GSM688968 h control replicate 2GSE3097Barley1 salinity stress study
9.098.9GSM688913 h control replicate 3GSE3097Barley1 salinity stress study
8.798.9GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
8.798.9GSM6890327 h control replicate3GSE3097Barley1 salinity stress study
8.698.8GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.810944Contig1156_atContig1156--4e-10At1g07790HTB1C.G.S.X.
0.660819Contig1141_s_atContig1141--2e-12At1g07790HTB1C.G.S.X.
0.670807Contig1157_atContig1157--6e-15At1g07790HTB1C.G.S.X.
0.670769Contig1162_atContig1162--4e-13At1g07790HTB1C.G.S.X.
0.640751Contig1136_atContig1136--7e-12At1g07790HTB1C.G.S.X.
0.600670Contig1158_x_atContig1158--7e-12At1g07790HTB1C.G.S.X.
0.610662Contig1123_s_atContig1123--4e-13At1g07790HTB1C.G.S.X.
0.570654Contig1181_x_atContig1181--8e-15At5g59910HTB4C.G.S.X.
0.606e-180628Contig1151_s_atContig1151--1e-7At3g09480histone H2B, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.413e-1789Arabidopsis thalianaAt1g07790837293HTB1Encodes a histone 2B (H2B) protein.---C.G.S.X.
0.459e-55214Glycine maxGma.16885.1.S1_atAW570537--4e-31At3g45980HTB9C.G.S.X.
0.541e-134480Oryza sativaOs01g0152300CF291303-Histone H2B.18e-24At1g07790HTB1C.G.S.X.
0.241e-757Populus trichocarpaPtpAffx.1169.2.S1_s_atCX657913--2e-42At3g46030HTB11C.G.S.X.
0.622e-144511Triticum aestivumTa.7378.21.S1_atBJ310041Histone H2B-6e-18At1g07790HTB1C.G.S.X.
0.511e-1995Vitis vinifera1615448_atCF568935--1e-61At5g59910HTB4C.G.S.X.
0.611e-156551Zea maysZm.14497.4.A1_atCF631109--4e-13At1g07790HTB1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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