CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig11250_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 66.9 Contig11250_s_at Contig11250 - - 4e+0 At5g22810 GDSL-motif lipase, putative S.X. H.G.
0.50 66.9 Contig11252_at Contig11252 - - 2e+0 At1g01130 unknown protein S.X. H.G.
0.23 26.1 Contig18428_at Contig18428 - - 7e-7 At1g15060 - S.X. H.G.
0.21 22.6 Contig3140_at Contig3140 - - 5e+0 At1g68870 unknown protein S.X. H.G.
0.14 12.9 Contig2873_s_at Contig2873 - - 2e-4 At1g31630 AGL86 (AGAMOUS-LIKE 86) S.X. H.G.
0.10 8.4 Contig8056_at Contig8056 - - 4e-4 At5g42890 SCP2 (STEROL CARRIER PROTEIN 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.4 99.9 GSM215731 gibberellin treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
15.0 99.5 GSM238426 Endosperm 72 h; Seed germination; Rep 1 GSE9365 Expression data from barley maturing and germinating grains
12.2 99.4 GSM215728 gibberellin treatment rep1 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
8.1 98.7 GSM382236 Root_Control2 GSE15295 Mercury toxicity in barley roots
6.2 98.0 GSM382237 Root_Control3 GSE15295 Mercury toxicity in barley roots
6.2 98.0 GSM382233 Root_Hg2 GSE15295 Mercury toxicity in barley roots
5.7 97.7 GSM282031 Malting_day1_Harrington_rep1 GSE11200 Expression data from malting barley seeds
5.6 97.7 GSM71151 Barke stress and unstress replicate 1 GSE3170 Barley single feature polymorphisms and drought stress gene expression
5.2 97.4 GSM282033 Malting_day4_Harrington_rep4 GSE11200 Expression data from malting barley seeds
5.1 97.3 GSM382234 Root_Hg3 GSE15295 Mercury toxicity in barley roots
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.55 0 1009 Contig11249_at Contig11249 - - 1e-2 At1g28640 GDSL-motif lipase, putative C.G. S.X.
0.17 1e-41 169 Contig17001_at Contig17001 - - 1e+0 At3g15830 phosphatidic acid phosphatase-related / PAP2-related C.G. S.X.
0.23 3e-30 131 Contig17000_s_at Contig17000 - - 7e-1 At3g15830 phosphatidic acid phosphatase-related / PAP2-related C.G. S.X.
0.05 3e-5 48 Contig13907_at Contig13907 - - 2e+0 At4g34290 SWIB complex BAF60b domain-containing protein C.G. S.X.
0.02 2e+0 32 Contig16735_at Contig16735 - - 6e+0 At5g42053 unknown protein C.G. S.X.
0.02 2e+0 32 Contig6680_at Contig6680 - - 2e-1 At2g23560 MES7 (METHYL ESTERASE 7) C.G. S.X.
0.03 8e+0 30 Contig12384_at Contig12384 - - 5e+0 At5g05150 AtATG18e C.G. S.X.
0.01 8e+0 30 Contig4412_at Contig4412 - - 6e-15 At1g79940 ATERDJ2A C.G. S.X.
0.02 8e+0 30 Contig12888_at Contig12888 - - 3e-2 At3g24200 FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 4e+0 32 Arabidopsis thaliana At5g22810 832344 GDSL-motif lipase, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM - - - C.G. S.X.
0.08 2e+0 34 Glycine max GmaAffx.12665.1.A1_at BE822073 - - 3e-3 At1g56670 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.35 2e-37 157 Oryza sativa Os05g0401000 AU077577 - Lipolytic enzyme, G-D-S-L family protein 2e+1 At5g50562 unknown protein C.G. S.X.
0.08 4e-7 56 Populus trichocarpa PtpAffx.3076.1.S1_s_at CV228815 hypothetical protein - 1e-5 At1g54790 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.36 2e-137 488 Triticum aestivum Ta.25272.1.S1_at CA680512 - - 7e-1 At3g05180 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1621182_at CD717861 hypothetical protein LOC100259532 - 1e-3 At3g48590 NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1) C.G. S.X.
0.13 5e-10 63 Zea mays Zm.8762.1.A1_at CF625727 - - 2e+0 At1g56670 GDSL-motif lipase/hydrolase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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