Gene omics information

Query gene ID Contig11215_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig11215_atContig11215--1e-3At3g11820SYP121 (SYNTAXIN OF PLANTS 121)S.X.H.G.
0.5066.9Contig11363_atContig11363--7e-7At3g29185unknown proteinS.X.H.G.
0.4053.1Contig15960_atContig15960--3e-2At4g03180unknown proteinS.X.H.G.
0.2021.1Contig16364_atContig16364--1e-1At5g50830unknown proteinS.X.H.G.
0.1716.9Contig10531_atContig10531--8e+0At5g24580copper-binding family proteinS.X.H.G.
0.097.4Contig14068_atContig14068--2e-8At1g16970KU70 (ARABIDOPSIS THALIANA KU70 HOMOLOG)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
191.6100.0GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
119.7100.0GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
89.7100.0GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
0.139.4GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
0.029.9GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
0.029.9GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seeds
0.029.9GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seeds
0.029.9GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
0.029.9GSM261060Xantha b-12 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
0.029.9GSM372942genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-446Contig11437_s_atContig11437--7e-2At3g06780glycine-rich proteinC.G.S.X.
0.036e-444Contig8260_s_atContig8260--2e+0At1g65230unknown proteinC.G.S.X.
0.029e-340Contig6894_atContig6894--2e-17At3g57610ADSS (ADENYLOSUCCINATE SYNTHASE)C.G.S.X.
0.039e-340Contig2614_atContig2614--2e+0At1g20020FNR2 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 2)C.G.S.X.
0.039e-340Contig11557_atContig11557--2e+0At5g27860unknown proteinC.G.S.X.
0.044e-238EBro08_SQ009_J21_atEBro08_SQ009_J21--8e-1At3g19090RNA-binding protein, putativeC.G.S.X.
0.034e-238Contig13514_atContig13514--2e+0At3g49690MYB84 (MYB DOMAIN PROTEIN 84)C.G.S.X.
0.044e-238Contig26331_atContig26331--3e+0At2g07363unknown proteinC.G.S.X.
0.034e-238Contig19537_atContig19537--2e+0At4g21830methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-344Arabidopsis thalianaAt3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.---C.G.S.X.
0.051e-448Glycine maxPsAffx.psMA011xO10f_s_atPsAffx.psMA011xO10f--3e+0At5g17840chaperone protein dnaJ-relatedC.G.S.X.
0.042e-344Oryza sativaOs05g01230009633.m00237-LOB domain protein 19e-4At1g31320LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4)C.G.S.X.
0.054e-446Populus trichocarpaPtpAffx.121966.1.S1_s_atAJ775134hypothetical protein-3e-3At1g71840transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.675e-46184Triticum aestivumTa.10482.1.S1_atBQ170867--2e-5At2g01340unknown proteinC.G.S.X.
0.049e-236Vitis vinifera1616828_s_atCD799685similar to Os03g0670700-1e+0At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
0.042e-342Zea maysZm.17340.1.S1_atCK370398--4e-1At4g31040proton extrusion protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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