Gene omics information

Query gene ID Contig11041_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig11041_atContig11041--1e+0At3g08940LHCB4.2 (light harvesting complex PSII)S.X.H.G.
0.6784.7Contig4511_atContig4511SGT1 protein-1e-11At4g11260SGT1BS.X.H.G.
0.6784.7Contig11168_atContig11168--1e-15At5g12480CPK7 (calmodulin-domain protein kinase 7)S.X.H.G.
0.6178.7Contig6254_atContig6254--3e+0At2g37950zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.6077.3Contig11519_atContig11519--2e-4At1g66680AR401S.X.H.G.
0.3647.1Contig16898_atContig16898--1e-1At1g44608unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.199.8GSM1611487% SWC rep3GSE6990Barley drought stress
15.299.5GSM398256Martin_3d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
12.799.4GSM398255Martin_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
11.999.3GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
11.799.3GSM398253Martin_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
11.199.2GSM398257Martin_3d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
10.799.2GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
10.099.1GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
9.699.0GSM398254Martin_1d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
9.098.9GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-136Contig17992_atContig17992--3e+0At2g27420cysteine proteinase, putativeC.G.S.X.
0.082e-136Contig24835_atContig24835--2e+1At5g27238-C.G.S.X.
0.012e-136Contig15296_s_atContig15296--9e-1At1g66780MATE efflux family proteinC.G.S.X.
0.046e-134HVSMEg0006G02r2_s_atHVSMEg0006G02r2--1e+0At1g10800unknown proteinC.G.S.X.
0.016e-134Contig9099_atContig9099--3e-3At4g26080ABI1 (ABA INSENSITIVE 1)C.G.S.X.
0.026e-134Contig14822_atContig14822--2e+0At1g02780emb2386 (embryo defective 2386)C.G.S.X.
0.036e-134Contig2103_atContig2103--3e-24At1g33140PGY2 (PIGGYBACK2)C.G.S.X.
0.036e-134HA07g21r_s_atHA07g21r--3e+0At3g20557unknown proteinC.G.S.X.
0.026e-134Contig11797_s_atContig11797--1e+1At4g21216unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt3g08940820043LHCB4.2 (light harvesting complex PSII)Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II---C.G.S.X.
0.034e-136Glycine maxPsAffx.C465000002_atPsAffx.C465000002--1e+0Atmg01330-C.G.S.X.
0.182e-1377Oryza sativaOs08g0327700AK107930.1-Late embryogenesis abundant (LEA) group 1 familyprotein2e+0At3g15340PPI2 (proton pump interactor 2)C.G.S.X.
0.034e-136Populus trichocarpaPtpAffx.219345.1.S1_atpmrna35235hypothetical protein-1e-49At1g55460Kin17 DNA-binding protein-relatedC.G.S.X.
0.633e-137488Triticum aestivumTa.28432.1.S1_atBQ171475--6e+0At5g20165unknown proteinC.G.S.X.
0.032e-238Vitis vinifera1622760_atCD719223hypothetical protein LOC100266427-1e+0At3g61920unknown proteinC.G.S.X.
0.045e-134Zea maysZm.2637.1.A1_atAW066634oleosin Bn-V-1e-2At2g06520PSBX (photosystem II subunit X)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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