Gene omics information

Query gene ID Contig11004_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.1Contig11004_atContig11004--3e-22At3g07010pectate lyase family proteinS.X.H.G.
0.7589.5Contig11955_atContig11955--4e-1At3g15630unknown proteinS.X.H.G.
0.7086.0Contig19483_atContig19483--8e-39At1g07170-S.X.H.G.
0.6784.7Contig25763_atContig25763--3e-1At3g55280RPL23AB (RIBOSOMAL PROTEIN L23AB)S.X.H.G.
0.5369.7Contig657_s_atContig657--1e-49At1g09200histone H3S.X.H.G.
0.4356.4Contig10319_atContig10319--2e-3At3g29170unknown proteinS.X.H.G.
0.3545.1Contig22781_atContig22781--1e+1At5g53895unknown proteinS.X.H.G.
0.2528.9Contig10816_atContig10816--2e+0At3g09160RNA recognition motif (RRM)-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.299.6GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. Dicktoo
15.399.6GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. Dicktoo
10.899.2GSM261039Dicktoo-deacclimation-rep1GSE10329Low temperature stress in cv. Dicktoo
9.799.0GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
9.198.9GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. Dicktoo
8.798.9GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. Dicktoo
8.798.9GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.298.7GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.798.3GSM261033Dicktoo-chilling-rep1GSE10329Low temperature stress in cv. Dicktoo
5.697.7GSM161221cold treatment rep3GSE6993Barley low temperature stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.412e-101369Contig11003_s_atContig11003--1e+0At4g36410UBC17 (UBIQUITIN-CONJUGATING ENZYME 17)C.G.S.X.
0.412e-101369Contig11003_atContig11003--1e+0At4g36410UBC17 (UBIQUITIN-CONJUGATING ENZYME 17)C.G.S.X.
0.278e-58224HS05C08u_atHS05C08u--9e-1At1g66245unknown proteinC.G.S.X.
0.021e-138Contig10295_atContig10295--4e-1At3g53620AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4)C.G.S.X.
0.031e-138HT12M15u_s_atHT12M15u--4e+0At4g16220hydrolase, acting on ester bondsC.G.S.X.
0.024e-136Contig17317_atContig17317--4e+0At4g15030unknown proteinC.G.S.X.
0.014e-136Contig5553_atContig5553--2e+0At4g15955epoxide hydrolase-relatedC.G.S.X.
0.012e+034Contig9876_atContig9876--1e+0At5g12240unknown proteinC.G.S.X.
0.012e+034Contig5530_s_atContig5530--2e+0At1g13370histone H3, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.253e-22107Arabidopsis thalianaAt3g07010819886pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;PBFO---C.G.S.X.
0.282e-23111Glycine maxGmaAffx.13717.1.S1_atBI316021--2e-63At5g63180pectate lyase family proteinC.G.S.X.
0.5801316Oryza sativaOs04g0137100AK060609.1-Pectate lyase (Fragment)8e-6At3g07010pectate lyase family proteinC.G.S.X.
0.282e-36155Populus trichocarpaPtpAffx.202640.1.S1_atpmrna5277hypothetical protein-2e-77At4g13710pectate lyase family proteinC.G.S.X.
0.610993Triticum aestivumTa.11160.1.S1_s_atBQ169530--5e-14At3g07010pectate lyase family proteinC.G.S.X.
0.181e-27123Vitis vinifera1607945_atAF243475.1pectate lyase-1e-39At1g67750pectate lyase family proteinC.G.S.X.
0.353e-137488Zea maysZmAffx.854.1.A1_atAI770665--8e-7At5g48900pectate lyase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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