Gene omics information

Query gene ID Contig10962_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8594.5Contig10962_atContig10962--1e+0At4g27657unknown proteinS.X.H.G.
0.5674.3Contig97_atContig97--2e-8At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)S.X.H.G.
0.4053.1Contig8059_atContig8059--8e-18At1g08720EDR1 (ENHANCED DISEASE RESISTANCE 1)S.X.H.G.
0.3849.5Contig8695_atContig8695--3e+0At3g28140calmodulin-binding proteinS.X.H.G.
0.3647.1Contig23564_atContig23564--1e+0At1g09932phosphoglycerate/bisphosphoglycerate mutase-relatedS.X.H.G.
0.3647.1Contig10840_atContig10840--4e-6At5g50780ATP bindingS.X.H.G.
0.3240.3Contig15747_atContig15747--8e-13At3g21640TWD1 (TWISTED DWARF 1)S.X.H.G.
0.3037.0Contig13261_atContig13261--4e-5At4g13730RabGAP/TBC domain-containing proteinS.X.H.G.
0.2935.5Contig8925_atContig8925--3e+0At5g66060iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsS.X.H.G.
0.2835.5Contig9554_s_atContig9554--8e-8At4g01560MEE49 (maternal effect embryo arrest 49)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.099.8GSM261021ABA-Control-rep1GSE10328ABA experiment
19.699.7GSM261026ABA-Early-rep3GSE10328ABA experiment
17.299.6GSM146369Golden Promise shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
13.799.5GSM261022ABA-Control-rep2GSE10328ABA experiment
9.799.0GSM261025ABA-Early-rep2GSE10328ABA experiment
9.699.0GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.499.0GSM146357Golden Promise Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
8.698.8GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
8.398.8GSM71148OWB-R unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
8.098.7GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.212e-1375Contig6537_atContig6537--1e+0At3g61640AGP20C.G.S.X.
0.055e-444Contig12469_atContig12469--5e+0At5g21125unknown proteinC.G.S.X.
0.025e-444Contig9987_atContig9987--3e+0At5g42060unknown proteinC.G.S.X.
0.032e-342Contig15859_atContig15859--1e-10At1g71820SEC6C.G.S.X.
0.028e-340Contig13863_atContig13863--9e-1At1g04778unknown proteinC.G.S.X.
0.078e-340Contig11825_atContig11825--1e+0At5g25490zinc finger (Ran-binding) family proteinC.G.S.X.
0.043e-238Contig19972_atContig19972--9e-1At1g32540LOL1 (LSD ONE LIKE 1)C.G.S.X.
0.033e-238Contig11371_atContig11371--6e+0At5g49300zinc finger (GATA type) family proteinC.G.S.X.
0.023e-238Contig2837_atContig2837--1e-12At3g23800SBP3 (selenium-binding protein 3)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e+034Arabidopsis thalianaAt4g27657828879unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P---C.G.S.X.
0.071e-757Glycine maxGma.5319.1.S1_atCD400770--4e+0At5g41300receptor-like protein kinase-relatedC.G.S.X.
0.184e-859Oryza sativaOsAffx.13362.2.S1_at---0C.G.S.X.
0.072e-344Populus trichocarpaPtp.1616.1.A1_s_atCV284041hypothetical protein-4e-1At5g03710unknown proteinC.G.S.X.
0.404e-68258Triticum aestivumTa.28857.1.S1_x_atCA604817--3e+0At2g37000TCP family transcription factor, putativeC.G.S.X.
0.061e-652Vitis vinifera1619401_atCF373107hypothetical protein LOC100250031-6e-2At5g24105AGP41 (ARABINOGALACTAN-PROTEIN 41)C.G.S.X.
0.251e-44178Zea maysZm.4378.1.A1_atCK370715hypothetical protein LOC100194381-1e+0At1g06475unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage