Gene omics information

Query gene ID Contig10954_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig10954_atContig10954--4e+0At3g21175ZML1 (ZIM-LIKE 1)S.X.H.G.
0.6077.3Contig4737_s_atContig4737--3e-29At2g35040AICARFT/IMPCHase bienzyme family proteinS.X.H.G.
0.5369.7Contig9632_atContig9632--1e-1At1g78370ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)S.X.H.G.
0.5369.7Contig12594_atContig12594--3e+0At5g11990proline-rich family proteinS.X.H.G.
0.5066.9Contig416_x_atContig416--5e-29At4g24190SHD (SHEPHERD)S.X.H.G.
0.4053.1Contig4763_atContig4763--3e-7At4g39960DNAJ heat shock family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.698.6GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.098.4GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.297.4GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.796.9GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.196.2GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.995.8GSM261069Albina f-17 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.995.8GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.695.3GSM372968genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.595.1GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.494.8GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.412e-151533Contig10955_atContig10955--5e-32At3g17750protein kinase family proteinC.G.S.X.
0.011e-136Contig4244_atContig4244--4e-9At1g80360aminotransferase class I and II family proteinC.G.S.X.
0.022e+032Contig6233_atContig6233--3e-8At5g08790ATAF2C.G.S.X.
0.022e+032Contig4617_atContig4617--2e+0At5g20460unknown proteinC.G.S.X.
0.022e+032Contig9350_s_atContig9350--3e-8At4g26701DNA binding / DNA topoisomerase type IC.G.S.X.
0.012e+032Contig9666_atContig9666--3e-1At1g44830AP2 domain-containing transcription factor TINY, putativeC.G.S.X.
0.022e+032Contig6233_s_atContig6233--3e-8At5g08790ATAF2C.G.S.X.
0.022e+032Contig4617_s_atContig4617--2e+0At5g20460unknown proteinC.G.S.X.
0.022e+032Contig4333_atContig4333--6e-10At1g64520RPN12a (Regulatory Particle non-ATPase 12a)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e+032Arabidopsis thalianaAt3g21175821670ZML1 (ZIM-LIKE 1)member of a novel family of plant-specific GATA-type transcription factors.---C.G.S.X.
0.031e+034Glycine maxGmaAffx.90387.1.S1_atCF806112--9e-5At1g32170XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4)C.G.S.X.
0.053e-1479Oryza sativaOs03g0719500AK106321.1-Ser-Thr protein kinase-like protein8e-99At1g73450protein kinase, putativeC.G.S.X.
0.065e+032Populus trichocarpaPtpAffx.219012.1.S1_s_atpmrna34797hypothetical protein-3e+0At3g0711060S ribosomal protein L13A (RPL13aA)C.G.S.X.
0.545e-70264Triticum aestivumTa.29633.1.S1_atCK209176--1e-4At3g17750protein kinase family proteinC.G.S.X.
0.047e-236Vitis vinifera1620034_atCF568846--4e+0At5g08410FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2)C.G.S.X.
0.032e+032Zea maysZm.9940.1.A1_atBM339055--3e-2At5g26860LON1 (LON PROTEASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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