CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig10771_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.1 Contig10771_s_at Contig10771 - - 3e+0 At5g06043 unknown protein S.X. H.G.
0.12 10.4 Contig22065_at Contig22065 - - 4e+0 At3g58710 WRKY69 S.X. H.G.
0.10 8.4 Contig2135_s_at Contig2135 - - 4e-2 At5g23660 MTN3 (Arabidopsis homolog of Medicago truncatula MTN3) S.X. H.G.
0.08 6.5 Contig13332_at Contig13332 - - 2e+0 At1g68280 thioesterase-related S.X. H.G.
0.06 4.8 Contig12408_at Contig12408 - - 6e-1 At2g34860 EDA3 (embryo sac development arrest 3) S.X. H.G.
0.06 4.8 Contig10064_at Contig10064 - - 2e+0 At2g12465 LCR50 (Low-molecular-weight cysteine-rich 50) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.0 98.7 GSM372957 genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.6 98.6 GSM261058 Xantha b-12 Cotrol rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.2 98.5 GSM372956 genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.7 98.3 GSM372940 genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.3 98.1 GSM372958 genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.3 97.4 GSM160744 drought control rep2 GSE6990 Barley drought stress
5.2 97.4 GSM372939 genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.2 97.4 GSM281748 Genotype: Morex - rep1 GSE11182 Steptoe x Morex seedling leaf comparison
5.2 97.4 GSM68900 8 h salt stressed replicate 3 GSE3097 Barley1 salinity stress study
4.9 97.1 GSM281750 Genotype: Morex - rep3 GSE11182 Steptoe x Morex seedling leaf comparison
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 2504 Contig10771_at Contig10771 - - 3e+0 At5g06043 unknown protein C.G. S.X.
0.56 0 922 HVSMEl0023I10r2_at HVSMEl0023I10r2 - - 4e+0 At1g16960 unknown protein C.G. S.X.
0.13 2e-64 246 Contig16997_at Contig16997 - - 4e+0 At2g38820 unknown protein C.G. S.X.
0.02 2e-2 40 Contig11336_at Contig11336 - - 5e-1 At1g68220 unknown protein C.G. S.X.
0.02 2e-2 40 Contig11335_s_at Contig11335 - - 4e-1 At1g68220 unknown protein C.G. S.X.
0.02 8e-2 38 Contig24198_at Contig24198 - - 9e-2 At2g19510 LBD8 (LOB DOMAIN-CONTAINING PROTEIN 8) C.G. S.X.
0.01 3e-1 36 Contig9729_at Contig9729 - - 3e+0 At3g56580 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 3e-1 36 Contig16551_at Contig16551 - - 3e-2 At3g58020 heat shock protein binding C.G. S.X.
0.02 3e-1 36 Contig12028_at Contig12028 - - 3e+0 At5g20110 dynein light chain, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At5g06043 3770609 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P - - - C.G. S.X.
0.03 2e-1 38 Glycine max PsAffx.C380000008_s_at PsAffx.C380000008 - - 4e+0 At3g09810 isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative C.G. S.X.
0.14 6e-18 93 Oryza sativa Os01g0101200 AK067866.1 - - 5e-4 At5g40405 - C.G. S.X.
0.02 2e-1 38 Populus trichocarpa PtpAffx.203458.1.S1_at pmrna6892 hypothetical protein - 4e-1 At3g09810 isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative C.G. S.X.
0.18 2e-41 171 Triticum aestivum TaAffx.66575.1.S1_at BG909660 - - 2e-1 At2g47485 unknown protein C.G. S.X.
0.03 2e-1 36 Vitis vinifera 1619655_at CF604767 hypothetical protein LOC100252634 - 4e-1 At3g09480 histone H2B, putative C.G. S.X.
0.23 3e-10 65 Zea mays Zm.2485.1.A1_at BG841709 hypothetical protein LOC100194257 - 5e+0 At4g05494 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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