Gene omics information

Query gene ID Contig10720_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5874.9Contig10720_atContig10720--1e-39At1g22620ATSAC1 (suppressor of actin 1)S.X.H.G.
0.5369.7Contig14778_atContig14778--7e-10At4g17640CKB2S.X.H.G.
0.5369.7EBro02_SQ006_L04_x_atEBro02_SQ006_L04--2e+1At5g39010unknown proteinS.X.H.G.
0.5066.9Contig13241_atContig13241--2e+0At2g06570unknown proteinS.X.H.G.
0.4458.9Contig1518_atContig1518--3e-2At3g05950germin-like protein, putativeS.X.H.G.
0.4458.9EBro02_SQ006_L04_atEBro02_SQ006_L04--2e+1At5g39010unknown proteinS.X.H.G.
0.3342.6Contig20512_s_atContig20512--1e+0At1g24430transferase/ transferase, transferring acyl groups other than amino-acyl groupsS.X.H.G.
0.3240.3Contig5004_atContig5004--9e-3At3g63190RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.298.0GSM3634655 mM B(OH)3 treatment (5B) - rep3GSE14521Late response to boron toxicity in barley leaves
5.197.3GSM3634635 mM B(OH)3 treatment (5B) - rep1GSE14521Late response to boron toxicity in barley leaves
5.197.3GSM36346710 mM B(OH)3 treatment (10B) - rep2GSE14521Late response to boron toxicity in barley leaves
4.997.1GSM36346810 mM B(OH)3 treatment (10B) - rep3GSE14521Late response to boron toxicity in barley leaves
4.796.9GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.396.4GSM372971genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.196.2GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.795.5GSM3634645 mM B(OH)3 treatment (5B) - rep2GSE14521Late response to boron toxicity in barley leaves
3.695.3GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.695.3GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-550Contig6755_s_atContig6755--4e-4At3g14205phosphoinositide phosphatase family proteinC.G.S.X.
0.028e-342Contig12067_atContig12067--1e-5At3g51460RHD4 (ROOT HAIR DEFECTIVE4)C.G.S.X.
0.015e-136Contig14849_atContig14849--7e-9At4g26555immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinC.G.S.X.
0.012e+034Contig8757_atContig8757--5e-5At3g21215RNA-binding protein, putativeC.G.S.X.
0.012e+034Contig11187_atContig11187--4e-2At5g11270OCP3 (OVEREXPRESSOR OF CATIONIC PEROXIDASE 3)C.G.S.X.
0.012e+034Contig7831_atContig7831--6e-23At4g17190FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2)C.G.S.X.
0.012e+034Contig4951_atContig4951--1e-48At1g69740HEMB1C.G.S.X.
0.017e+032Contig8443_atContig8443--4e-3At1g56170NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)C.G.S.X.
0.017e+032Contig8443_s_atContig8443--4e-3At1g56170NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.171e-39165Arabidopsis thalianaAt1g22620838868ATSAC1 (suppressor of actin 1)SAC domain phosphoinositide (3,5)P2 phosphatase. Colocalized with a Golgi Marker. Required for normal cell morphogenesis, cell wall synthesis, and actin organization.---C.G.S.X.
0.116e-1583Glycine maxGmaAffx.86074.1.S1_atAW132301--9e-29At1g22620ATSAC1 (suppressor of actin 1)C.G.S.X.
0.510769Oryza sativaOs08g0109100AK121887.1-SAC domain protein 1 (FIG4-like protein AtFIG4)2e-36At1g22620ATSAC1 (suppressor of actin 1)C.G.S.X.
0.188e-30133Populus trichocarpaPtpAffx.7225.1.S1_atCF234583hypothetical protein-1e-51At1g22620ATSAC1 (suppressor of actin 1)C.G.S.X.
0.7601308Triticum aestivumTa.5802.1.S1_atBQ801997--7e-21At1g22620ATSAC1 (suppressor of actin 1)C.G.S.X.
0.063e-1065Vitis vinifera1622238_atCF609236hypothetical protein LOC100242326-4e-14At3g14205phosphoinositide phosphatase family proteinC.G.S.X.
0.367e-77287Zea maysZm.7705.1.A1_atAY106959.1hypothetical protein LOC100279320-7e-3At1g22620ATSAC1 (suppressor of actin 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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