Gene omics information

Query gene ID Contig10688_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig10688_atContig10688--8e+0At5g65430GRF8 (GENERAL REGULATORY FACTOR 8)S.X.H.G.
0.7388.7Contig13383_atContig13383--1e-8At2g48010RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3)S.X.H.G.
0.6784.7Contig26243_s_atContig26243--4e-6At3g17300-S.X.H.G.
0.6784.7Contig10689_atContig10689--3e-10At2g40360transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.4458.9EBpi01_SQ001_A05_s_atEBpi01_SQ001_A05--3e+0At2g31005-S.X.H.G.
0.1919.6Contig21173_atContig21173--3e-23At2g35190NPSN11 (NOVEL PLANT SNARE 11)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.796.9GSM31124928-4_without_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
4.396.4GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.196.2GSM372953genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.096.0GSM372971genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.895.7GSM372941genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.695.3GSM372942genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.595.1GSM310866lina_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
3.494.8GSM261022ABA-Control-rep2GSE10328ABA experiment
3.394.6GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.194.1GSM372969genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-240Contig24882_atContig24882--9e-1At3g09032unknown proteinC.G.S.X.
0.027e-238Contig8386_atContig8386--1e-4At5g54680ILR3 (iaa-leucine resistant3)C.G.S.X.
0.027e-238Contig8818_atContig8818--2e+0At5g47080CKB1C.G.S.X.
0.023e-136Contig7646_atContig7646--9e-6At1g51590mannosyl-oligosaccharide 1,2-alpha-mannosidase, putativeC.G.S.X.
0.023e-136Contig14285_atContig14285--2e-2At5g37360unknown proteinC.G.S.X.
0.013e-136Contig7263_atContig7263--5e-2At5g63330-C.G.S.X.
0.023e-136Contig5477_atContig5477--2e-13At4g26860pyridoxal phosphate bindingC.G.S.X.
0.011e+034Contig7529_atContig7529--5e-5At4g32400SHS1 (SODIUM HYPERSENSITIVE 1)C.G.S.X.
0.021e+034Contig22860_atContig22860--4e-1At1g67030ZFP6 (ZINC FINGER PROTEIN 6)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.028e+032Arabidopsis thalianaAt5g65430836668GRF8 (GENERAL REGULATORY FACTOR 8)member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1---C.G.S.X.
0.055e-240Glycine maxGmaAffx.89975.1.S1_atCF805700--3e-1At4g14410basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.432e-70268Oryza sativaOs02g0116600AK103434.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein7e-1At5g43175basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.042e-138Populus trichocarpaPtpAffx.17445.1.S1_a_atCK090987hypothetical protein-7e-75At5g54680ILR3 (iaa-leucine resistant3)C.G.S.X.
0.503e-175615Triticum aestivumTaAffx.117651.1.S1_s_atCA659377--2e+1At5g01800saposin B domain-containing proteinC.G.S.X.
0.023e+032Vitis vinifera1621757_atCF373247--8e-1At1g29960peptidase/ serine-type peptidaseC.G.S.X.
0.341e-33143Zea maysZm.6653.1.S1_atCA404358hypothetical protein LOC100274393-6e-4At5g54680ILR3 (iaa-leucine resistant3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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