Gene omics information

Query gene ID Contig10472_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4458.9Contig10472_atContig10472--9e-3At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)S.X.H.G.
0.2528.9Contig7539_s_atContig7539--3e-13At4g07960ATCSLC12 (CELLULOSE-SYNTHASE LIKE C12)S.X.H.G.
0.2122.6Contig8996_s_atContig8996--3e-2At1g57560AtMYB50 (myb domain protein 50)S.X.H.G.
0.1412.9EBpi07_SQ001_A11_atEBpi07_SQ001_A11--4e+0At5g43850ARD4S.X.H.G.
0.119.4Contig5842_atContig5842--8e-6At3g12820AtMYB10 (myb domain protein 10)S.X.H.G.
0.075.8HU11F22u_s_atHU11F22u--4e+0At5g12320ankyrin repeat family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.499.7GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
19.499.7GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
14.199.5GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
12.799.4GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
12.399.4GSM3634655 mM B(OH)3 treatment (5B) - rep3GSE14521Late response to boron toxicity in barley leaves
11.899.3GSM36346710 mM B(OH)3 treatment (10B) - rep2GSE14521Late response to boron toxicity in barley leaves
11.499.3GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leaves
10.799.2GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
10.599.2GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
10.399.1GSM372939genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.103e-1995Contig2471_atContig2471--1e-1At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.061e-1273Contig6636_atContig6636--4e-11At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.091e-1273Contig2481_s_atContig2481--8e-6At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.047e-857Contig17873_atContig17873--4e-1At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
0.032e-550Contig8984_atContig8984--2e+0At2g05520GRP-3 (GLYCINE-RICH PROTEIN 3)C.G.S.X.
0.031e-344Contig2454_atContig2454phospholipid hydroperoxide glutathione peroxidase-like protein-5e-72At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)C.G.S.X.
0.024e-342Contig4317_atContig4317--2e-1At1g36060AP2 domain-containing transcription factor, putativeC.G.S.X.
0.032e-240Contig7722_atContig7722--4e-5At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.052e-240Contig6526_atContig6526--7e-1At5g11550bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.079e-342Arabidopsis thalianaAt2g44840819093ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.---C.G.S.X.
0.141e-552Glycine maxGmaAffx.15015.1.S1_atBI787734--1e-9At2g31230ATERF15 (Ethylene-responsive element binding factor 15)C.G.S.X.
0.292e-91337Oryza sativaOs02g0654700AK073812.1-Ethylene-responsive element binding protein3e-3At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
0.065e-240Populus trichocarpaPtpAffx.203023.1.S1_x_atpmrna5983AP2/ERF domain-containing transcription factor-1e-22At5g13910LEP (LEAFY PETIOLE)C.G.S.X.
0.583e-92339Triticum aestivumTaAffx.85427.1.S1_atBQ800695--6e+0At5g48210unknown proteinC.G.S.X.
0.081e-240Vitis vinifera1609683_atCF604955hypothetical protein LOC100249982-2e-11At2g47520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.331e-64246Zea maysZm.8626.1.A1_atBM348921hypothetical protein LOC100274398-1e+0At5g61600ethylene-responsive element-binding family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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