Gene omics information

Query gene ID	Contig10400_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	74.9	Contig10400_s_at	Contig10400	-	-	4e-5	At1g26850	dehydration-responsive family protein	S.X.	H.G.	Please select
0.46	61.0	Contig25404_at	Contig25404	-	-	3e-1	At1g32880	importin alpha-1 subunit, putative	S.X.	H.G.	Please select
0.40	53.1	Contig10313_at	Contig10313	-	-	1e-18	At4g34830	-	S.X.	H.G.	Please select
0.23	26.1	Contig9702_at	Contig9702	-	-	2e-8	At1g54130	RSH3 (RELA/SPOT HOMOLOG 3)	S.X.	H.G.	Please select
0.22	24.2	Contig19458_at	Contig19458	-	-	2e+0	At4g29100	ethylene-responsive family protein	S.X.	H.G.	Please select
0.19	19.6	Contig24399_at	Contig24399	-	-	1e+0	At3g22940	F-box family protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.3	98.5	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.4	98.1	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.0	97.9	GSM372963	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.6	97.7	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.1	97.3	GSM372944	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.1	97.3	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.0	97.2	GSM372948	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.9	97.1	GSM372964	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.8	97.0	GSM372946	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.6	96.8	GSM372949	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.58	0	946	Contig10399_at	Contig10399	-	-	3e-5	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.12	1e-16	87	Contig21277_at	Contig21277	-	-	8e-12	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.10	6e-9	61	Contig13791_at	Contig13791	-	-	3e-11	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.01	8e-2	38	Contig7117_at	Contig7117	-	-	8e-4	At3g17880	ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN)	C.G.	S.X.	Please select
0.01	3e-1	36	Contig8375_at	Contig8375	-	-	1e-37	At3g23300	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.02	3e-1	36	HV_CEb0021P13r2_at	HV_CEb0021P13r2	-	-	4e+0	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.03	3e-1	36	Contig10142_at	Contig10142	-	-	1e-1	At1g12665	-	C.G.	S.X.	Please select
0.02	1e+0	34	HS05I21u_at	HS05I21u	-	-	4e+0	At3g01322	-	C.G.	S.X.	Please select
0.01	1e+0	34	Contig13865_at	Contig13865	-	-	2e-10	At3g10220	tubulin folding cofactor B	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	4e-5	50	Arabidopsis thaliana	At1g26850	839229	dehydration-responsive family protein	F:unknown;P:unknown;C:Golgi apparatus, membrane;PBO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	2e-5	52	Glycine max	Gma.7233.1.S1_at	BQ453257	-	-	2e-39	At4g18030	dehydration-responsive family protein	C.G.	S.X.	Please select
0.48	5e-145	515	Oryza sativa	Os10g0569300	AK072459.1	-	Putative methyltransferase DUF248 family protein	3e-10	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.15	2e-7	57	Populus trichocarpa	Ptp.532.1.S1_at	CK088410	hypothetical protein	-	1e-4	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.44	6e-140	498	Triticum aestivum	Ta.30375.1.A1_at	CK199586	-	-	4e-7	At2g43200	dehydration-responsive family protein	C.G.	S.X.	Please select
0.16	4e-15	81	Vitis vinifera	1618429_at	CB980302	hypothetical protein LOC100267238	-	5e-4	At2g40280	dehydration-responsive family protein	C.G.	S.X.	Please select
0.04	1e+0	34	Zea mays	Zm.3522.1.S1_at	BG265505	-	-	1e-19	At4g00740	dehydration-responsive protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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