Gene omics information

Query gene ID Contig10383_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig10383_atContig10383--6e-4At2g22540SVP (SHORT VEGETATIVE PHASE)S.X.H.G.
0.8092.5Contig10382_s_atContig10382--6e-38At5g45190cyclin family proteinS.X.H.G.
0.7388.7Contig10000_s_atContig10000--8e+0At5g05113unknown proteinS.X.H.G.
0.7388.7Contig10001_atContig10001--9e-6At3g01410RNase H domain-containing proteinS.X.H.G.
0.6784.7Contig10380_atContig10380--4e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeS.X.H.G.
0.2630.4HV_CEb0017C21r2_s_atHV_CEb0017C21r2--9e+0At4g05180PSBQ-2S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
70.5100.0GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
53.3100.0GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
37.799.9GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
16.399.6GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
14.599.5GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
12.399.4GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
8.698.8GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.398.5GSM419981Seed_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
7.398.5GSM440975Control seed_Rep1GSE17669Gene expression in the barley spike during drought stress
7.198.4GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.112e-33143Contig12483_atContig12483--2e-3At3g57390AGL18C.G.S.X.
0.101e-31137Contig11029_atContig11029--2e-10At2g42830SHP2 (SHATTERPROOF 2)C.G.S.X.
0.102e-29129Contig16350_atContig16350--9e-3At3g57390AGL18C.G.S.X.
0.084e-25115Contig2198_atContig2198--3e-6At1g24260SEP3 (SEPALLATA3)C.G.S.X.
0.112e-23109Contig12031_atContig12031--6e-1At2g22630AGL17 (agamous-like 17)C.G.S.X.
0.099e-23107Contig2200_s_atContig2200--2e-3At2g45650AGL6 (AGAMOUS-LIKE 6)C.G.S.X.
0.071e-21103Contig7416_atContig7416--2e-4At5g60910AGL8 (agamous-like 8)C.G.S.X.
0.081e-1893Contig4517_atContig4517--1e-7At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.098e-1787Contig3831_atContig3831--3e-15At4g18960AG (AGAMOUS)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-446Arabidopsis thalianaAt2g22540816787SVP (SHORT VEGETATIVE PHASE)Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.---C.G.S.X.
0.035e-240Glycine maxGma.6760.1.S1_atBU544178--1e-42At4g09960STK (SEEDSTICK)C.G.S.X.
0.164e-28127Oryza sativaOsAffx.23186.1.S1_at---0C.G.S.X.
0.045e-240Populus trichocarpaPtpAffx.43839.2.S1_atCV256507hypothetical protein-2e-15At4g09960STK (SEEDSTICK)C.G.S.X.
0.6401086Triticum aestivumTa.21250.1.S1_atBJ273029MADS-box transcription factor TaAGL18-6e-4At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.044e-238Vitis vinifera1621836_atAF373604.1MADS-box protein 5-2e-9At4g09960STK (SEEDSTICK)C.G.S.X.
0.152e-29129Zea maysZm.15830.1.A1_atAI491392--3e-5At4g22950AGL19 (AGAMOUS-LIKE 19)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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