CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig10310_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.98 100.0 Contig10310_at Contig10310 - - 8e-3 At1g75690 chaperone protein dnaJ-related S.X. H.G.
0.44 58.9 Contig21425_at Contig21425 - - 6e+0 At5g13340 unknown protein S.X. H.G.
0.35 45.1 HU05P16u_s_at HU05P16u - - 4e+0 At3g29670 transferase family protein S.X. H.G.
0.32 40.3 Contig18046_at Contig18046 - - 4e-1 At2g11910 unknown protein S.X. H.G.
0.29 35.5 Contig12100_at Contig12100 - - 1e-3 At2g29180 unknown protein S.X. H.G.
0.26 30.4 Contig14290_at Contig14290 - - 9e-15 At5g57030 LUT2 (LUTEIN DEFICIENT 2) S.X. H.G.
0.26 30.4 Contig13467_at Contig13467 - - 5e-10 At1g77180 chromatin protein family S.X. H.G.
0.24 27.2 Contig14182_at Contig14182 - - 2e+0 At3g05170 phosphoglycerate/bisphosphoglycerate mutase family protein S.X. H.G.
0.24 27.2 Contig10279_at Contig10279 - - 3e+0 At1g52830 IAA6 (INDOLE-3-ACETIC ACID 6) S.X. H.G.
0.22 24.2 Contig17591_at Contig17591 - - 1e-8 At3g06350 MEE32 (MATERNAL EFFECT EMBRYO ARREST 32) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.0 99.6 GSM261058 Xantha b-12 Cotrol rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.5 99.0 GSM261061 Xantha b-12 Hardened rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.2 99.0 GSM160744 drought control rep2 GSE6990 Barley drought stress
7.3 98.5 GSM281750 Genotype: Morex - rep3 GSE11182 Steptoe x Morex seedling leaf comparison
6.4 98.1 GSM281749 Genotype: Morex - rep2 GSE11182 Steptoe x Morex seedling leaf comparison
6.1 98.0 GSM372958 genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.8 97.8 GSM261070 Albina f-17 Control rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.7 97.7 GSM160815 drought control rep3 GSE6990 Barley drought stress
5.7 97.7 GSM372961 genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.5 97.6 GSM261057 Xantha b-12 Cotrol rep2 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-6 54 Contig5709_at Contig5709 - - 3e-56 At2g30200 [acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferase C.G. S.X.
0.03 4e-6 52 Contig13233_at Contig13233 - - 5e-1 At2g42260 UVI4 (UV-B-INSENSITIVE 4) C.G. S.X.
0.03 6e-5 48 Contig8434_at Contig8434 - - 1e-1 At1g74710 isochorismate synthase 1 (ICS1) / isochorismate mutase C.G. S.X.
0.03 1e-3 44 Contig1383_s_at Contig1383 - - 5e-9 At3g15353 MT3 (METALLOTHIONEIN 3) C.G. S.X.
0.01 1e-3 44 Contig4578_at Contig4578 - - 7e-9 At5g21150 PAZ domain-containing protein / piwi domain-containing protein C.G. S.X.
0.03 1e-3 44 Contig1383_at Contig1383 - - 5e-9 At3g15353 MT3 (METALLOTHIONEIN 3) C.G. S.X.
0.04 1e-3 44 Contig21692_at Contig21692 - - 3e+0 At2g35970 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein C.G. S.X.
0.03 1e-3 44 Contig17054_at Contig17054 - - 8e+0 At5g52110 HCF208 (HIGH CHLOROPHYLL FLUORESCENCE 208) C.G. S.X.
0.03 1e-3 44 Contig8552_at Contig8552 - - 2e+0 At4g15830 binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 8e-3 42 Arabidopsis thaliana At1g75690 843903 chaperone protein dnaJ-related F:unfolded protein binding, heat shock protein binding;P:protein folding;C:chloroplast thylakoid membrane, chloroplast stroma, chloroplast;BPOMFA - - - C.G. S.X.
0.03 4e-2 40 Glycine max GmaAffx.12286.2.S1_at BM108265 - - 1e-11 At5g38510 rhomboid family protein C.G. S.X.
0.34 3e-53 210 Oryza sativa Os03g0244000 AK061036.1 - Conserved hypothetical protein 2e-6 At1g75690 chaperone protein dnaJ-related C.G. S.X.
0.10 3e-6 54 Populus trichocarpa PtpAffx.75239.1.A1_at CV278726 hypothetical protein - 3e+0 At1g75690 chaperone protein dnaJ-related C.G. S.X.
0.66 0 922 Triticum aestivum Ta.4255.1.S1_x_at BE591014 - - 7e-3 At1g75690 chaperone protein dnaJ-related C.G. S.X.
0.04 2e-3 42 Vitis vinifera 1614133_at CD711415 hypothetical protein LOC100255873 - 5e-2 At1g43800 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative C.G. S.X.
0.33 9e-50 196 Zea mays Zm.6673.1.A1_at BM268104 hypothetical protein LOC100278360 - 1e-10 At1g75690 chaperone protein dnaJ-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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