Gene omics information

Query gene ID	Contig10292_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	69.7	Contig10292_at	Contig10292	-	-	9e-23	At1g07650	leucine-rich repeat transmembrane protein kinase, putative	S.X.	H.G.	Please select
0.67	84.7	Contig18288_at	Contig18288	-	-	1e+0	At1g73325	trypsin and protease inhibitor family protein / Kunitz family protein	S.X.	H.G.	Please select
0.57	74.9	Contig16322_at	Contig16322	-	-	5e+0	At5g57500	transferase, transferring glycosyl groups	S.X.	H.G.	Please select
0.52	68.3	Contig10891_s_at	Contig10891	-	-	7e-1	At3g50695	unknown protein	S.X.	H.G.	Please select
0.44	58.9	Contig13879_at	Contig13879	-	-	6e-4	At4g38620	MYB4	S.X.	H.G.	Please select
0.43	56.4	Contig10690_at	Contig10690	-	-	2e-5	At2g35530	bZIP transcription factor family protein	S.X.	H.G.	Please select
0.40	53.1	Contig13528_at	Contig13528	-	-	9e-9	At1g29690	CAD1 (constitutively activated cell death 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
28.1	99.8	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
23.6	99.8	GSM372964	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
20.8	99.7	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
20.6	99.7	GSM372966	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.9	99.4	GSM372949	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.3	99.4	GSM372962	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.5	99.3	GSM372952	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.7	99.2	GSM372948	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.3	99.1	GSM372965	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.6	98.8	GSM372951	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.26	2e-126	452	HV_CEa0008I06r2_at	HV_CEa0008I06r2	-	-	7e-1	At4g24180	-	C.G.	S.X.	Please select
0.04	8e-3	42	Contig13522_at	Contig13522	-	-	4e-17	At4g02630	protein kinase family protein	C.G.	S.X.	Please select
0.01	3e-2	40	Contig14472_at	Contig14472	-	-	4e-8	At1g28440	HSL1 (HAESA-Like 1)	C.G.	S.X.	Please select
0.01	1e-1	38	Contig9358_at	Contig9358	-	-	6e-1	At5g43320	ckl8 (Casein Kinase I-like 8)	C.G.	S.X.	Please select
0.01	2e+0	34	Contig17887_at	Contig17887	-	-	2e-3	At4g32551	LUG (LEUNIG)	C.G.	S.X.	Please select
0.01	2e+0	34	Contig5016_at	Contig5016	-	-	1e-30	At2g47060	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.02	2e+0	34	Contig17584_at	Contig17584	-	-	8e-21	At1g26150	PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10)	C.G.	S.X.	Please select
0.01	2e+0	34	Contig11140_at	Contig11140	-	-	2e+0	At2g11890	adenylate cyclase	C.G.	S.X.	Please select
0.01	2e+0	34	Contig10854_s_at	Contig10854	-	-	4e-33	At2g43230	serine/threonine protein kinase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	9e-23	109	Arabidopsis thaliana	At1g07650	837278	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.18	2e-30	135	Glycine max	Gma.17602.1.S1_at	BM271089	-	-	4e-42	At1g53430	leucine-rich repeat family protein / protein kinase family protein	C.G.	S.X.	Please select
0.56	0	960	Oryza sativa	Os09g0345300	AK066121.1	-	Receptor protein kinase	2e-21	At1g07650	leucine-rich repeat transmembrane protein kinase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.21	5e-25	117	Populus trichocarpa	PtpAffx.225270.1.S1_at	pmrna44499	hypothetical protein	-	8e-17	At1g29720	protein kinase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	7e-150	531	Triticum aestivum	Ta.11089.1.A1_at	CA670916	-	-	4e+0	At5g64480	unknown protein	C.G.	S.X.	Please select
0.22	1e-40	167	Vitis vinifera	1613324_at	CB971883	hypothetical protein LOC100246997	-	4e-54	At1g53440	leucine-rich repeat family protein / protein kinase family protein	C.G.	S.X.	Please select
0.02	7e-3	42	Zea mays	Zm.689.1.S1_at	BM074684	serine/threonine-protein kinase receptor	-	2e-6	At3g09010	protein kinase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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