Gene omics information

Query gene ID Contig10279_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig10279_atContig10279--3e+0At1g52830IAA6 (INDOLE-3-ACETIC ACID 6)S.X.H.G.
0.5774.9Contig18385_atContig18385--2e+0Atmg01170-S.X.H.G.
0.5066.9Contig5161_s_atContig5161--9e-3At1g54860unknown proteinS.X.H.G.
0.4458.9Contig11977_atContig11977--6e-1At5g62490ATHVA22BS.X.H.G.
0.3342.6Contig5117_atContig5117--8e-2At5g60500undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family proteinS.X.H.G.
0.3138.6Contig12784_atContig12784--2e-10At1g28520VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN)S.X.H.G.
0.2122.6Contig11464_atContig11464--6e-20At1g55740AtSIP1 (Arabidopsis thaliana seed imbibition 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.199.8GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
13.999.5GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
10.699.2GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.198.0GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.198.0GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.297.4GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.696.8GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
4.596.7GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.296.3GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.196.2GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-446Contig13976_atContig13976--5e-13At2g17350unknown proteinC.G.S.X.
0.018e-238Contig24397_atContig24397--1e-1At5g02230haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.013e-136Contig10479_atContig10479--2e+0At3g22820allergen-relatedC.G.S.X.
0.021e+034Contig14145_atContig14145--2e+0At3g30220unknown proteinC.G.S.X.
0.021e+034Contig7914_atContig7914--2e+0At4g27540PRA1.H (PRENYLATED RAB ACCEPTOR 1.H)C.G.S.X.
0.011e+034Contig12779_atContig12779--2e-2At4g35470leucine-rich repeat family proteinC.G.S.X.
0.021e+034Contig25737_atContig25737--3e-1At1g13540unknown proteinC.G.S.X.
0.021e+034Contig11373_atContig11373--5e+0At5g02230haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.025e+032Contig4745_atContig4745--2e+0At5g37520unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Arabidopsis thalianaAt1g52830841717IAA6 (INDOLE-3-ACETIC ACID 6)An extragenic dominant suppressor of the hy2 mutant phenotype. Also exhibits aspects of constitutive photomorphogenetic phenotype in the absence of hy2. Mutants have dominant leaf curling phenotype shortened hypocotyls and reduced apical hook. Induced by indole-3-acetic acid.---C.G.S.X.
0.024e+034Glycine maxPsAffx.psMC009xE23f_atPsAffx.psMC009xE23f--1e+1At5g03550-C.G.S.X.
0.280724Oryza sativaOs03g0766900AK103989.1-Conserved hypothetical protein3e-2At4g25845unknown proteinC.G.S.X.
0.029e-136Populus trichocarpaPtpAffx.57813.1.A1_atCV245986hypothetical protein-4e-10At4g35190unknown proteinC.G.S.X.
0.037e-446Triticum aestivumTa.6528.2.S1_atBJ301417--3e-4At2g17350unknown proteinC.G.S.X.
0.043e+032Vitis vinifera1611188_atCF604006hypothetical protein LOC100243552-3e-4At3g18940clast3-relatedC.G.S.X.
0.023e-446Zea maysZm.13621.1.A1_atCF632782hypothetical protein LOC100191615-4e-10At2g17350unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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