CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig10144_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 94.0 Contig10144_s_at Contig10144 - - 1e-13 At1g52510 hydrolase, alpha/beta fold family protein S.X. H.G.
0.38 49.5 Contig4782_s_at Contig4782 - - 4e-1 At5g11950 protein homodimerization S.X. H.G.
0.18 18.2 Contig7474_s_at Contig7474 - - 6e+0 At5g40650 SDH2-2 S.X. H.G.
0.07 5.8 Contig16331_at Contig16331 - - 9e+0 Atmg01310 - S.X. H.G.
0.04 3.4 Contig10978_at Contig10978 - - 5e-14 At1g13270 MAP1C (METHIONINE AMINOPEPTIDASE 1B) S.X. H.G.
0.04 3.4 Contig4783_at Contig4783 - - 8e-20 At3g22960 PKP-ALPHA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.8 98.6 GSM398261 HS41-1_0d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.3 98.5 GSM372956 genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.3 98.1 GSM261038 Dicktoo-subzero-rep3 GSE10329 Low temperature stress in cv. Dicktoo
6.2 98.0 GSM372940 genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.7 97.7 GSM372939 genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.4 97.5 GSM261058 Xantha b-12 Cotrol rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.4 97.5 GSM372957 genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.2 97.4 GSM372958 genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.2 97.4 GSM261052 Bonus Control rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.2 97.4 GSM372938 genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1471 Contig10144_at Contig10144 - - 1e-13 At1g52510 hydrolase, alpha/beta fold family protein C.G. S.X.
0.02 7e-4 44 Contig16523_at Contig16523 - - 6e-13 At1g55200 protein kinase family protein C.G. S.X.
0.03 4e-2 38 Contig22209_at Contig22209 - - 4e+0 At5g62930 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.01 7e-1 34 Contig9708_at Contig9708 - - 2e-1 At4g13100 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 7e-1 34 Contig14045_at Contig14045 - - 2e-18 At3g03690 UNE7 (unfertilized embryo sac 7) C.G. S.X.
0.03 7e-1 34 Contig23611_at Contig23611 - - 3e-7 At5g27450 MK (MEVALONATE KINASE) C.G. S.X.
0.02 3e+0 32 Contig20765_at Contig20765 - - 1e-4 At3g05510 phospholipid/glycerol acyltransferase family protein C.G. S.X.
0.02 3e+0 32 Contig15140_at Contig15140 - - 3e-1 At5g05500 pollen Ole e 1 allergen and extensin family protein C.G. S.X.
0.02 3e+0 32 rbaal7g10_at rbaal7g10 - - 5e+0 At5g03230 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 1e-13 77 Arabidopsis thaliana At1g52510 841682 hydrolase, alpha/beta fold family protein F:hydrolase activity, catalytic activity;P:unknown;C:chloroplast, chloroplast envelope;BOPMFA - - - C.G. S.X.
0.05 3e-5 50 Glycine max Gma.4553.1.A1_at BU081133 - - 1e-48 At1g52510 hydrolase, alpha/beta fold family protein C.G. S.X.
0.30 6e-100 365 Oryza sativa Os04g0644600 AK099966.1 - Epoxide hydrolase family protein 4e-21 At1g52510 hydrolase, alpha/beta fold family protein C.G. S.X.
0.09 2e-9 63 Populus trichocarpa PtpAffx.112731.1.A1_at CV239317 - - 2e-18 At1g52510 hydrolase, alpha/beta fold family protein C.G. S.X.
0.36 6e-34 145 Triticum aestivum TaAffx.54376.1.S1_at CA682436 - - 4e+0 At4g26960 unknown protein C.G. S.X.
0.06 5e-4 44 Vitis vinifera 1616407_at CD715829 hypothetical protein LOC100250971 - 7e-9 At1g52510 hydrolase, alpha/beta fold family protein C.G. S.X.
0.03 2e-1 36 Zea mays Zm.18461.1.A1_at CO523653 - - 2e-8 At5g56750 Ndr family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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