Gene omics information

Query gene ID At5g67420
Gene name LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g67420836878LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)F:unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5469.5At3g50830824247COR413-PM2 (COLD-REGULATED 413-PLASMA MEMBRANE 2)cold acclimation protein WCOR413-like protein beta form. Transcript is not detectable.S.X.H.G.
0.5166.3At2g46330819241AGP16 (ARABINOGALACTAN PROTEIN 16)Encodes arabinogalactan protein (AGP16).S.X.H.G.
0.4761.2At5g27350832794SFP1Encodes a sugar-porter family protein that is induced during leaf senescence. The increase in its gene expression during leaf senescence is paralleled by an accumulation of monosaccharides.S.X.H.G.
0.4659.8At1g17970838377zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
0.4659.8At5g60920836213COB (COBRA)Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.S.X.H.G.
0.4659.8At4g26710828778ATP synthase subunit H family proteinF:hydrogen ion transmembrane transporter activity;P:ATP hydrolysis coupled proton transport;C:vacuole;MPOFS.X.H.G.
0.4457.2At4g25570828662ACYB-2Encodes cytochrome b561.S.X.H.G.
0.4355.3At5g56170835716-F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
0.4253.9At3g26520822259TIP2 (TONOPLAST INTRINSIC PROTEIN 2)gamma tonoplast intrinsic protein 2 (TIP2). expressed throughout the plant and transcript level is increased upon NaCl or ABA treatments. NaCl stress-sensitive yeast mutant strains exhibit more resistance to salt when expressing this protein.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.599.5GSM231198wild-type at T0.5, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
14.999.4GSM269494mkk1/mkk2, no-treatment, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
12.299.3E-TABM-62-raw-cel-720975454
11.199.2GSM231197wild-type at T0.5, biological rep2GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
10.999.2E-TABM-62-raw-cel-720978513
10.599.2E-TABM-62-raw-cel-720974138
10.599.2GSM231204chl1 at T0.5, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
10.199.2GSM226281YHB_Rc50_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
9.899.1GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
9.499.1E-TABM-224-raw-cel-720976649
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.691e-90333At3g49940824156LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38)F:unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.316e-37155At4g37540829909LBD39 (LOB DOMAIN-CONTAINING PROTEIN 39)F:unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e-240At4g18630827597unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMOFC.G.S.X.
0.012e-240At2g32240817784-F:molecular_function unknown;P:response to cadmium ion;C:plasma membrane;MOBFPAVC.G.S.X.
0.024e-136At5g38386833823F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.024e-136At4g23750828475CRF2 (CYTOKININ RESPONSE FACTOR 2)encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.C.G.S.X.
0.034e-136At1g47970841215unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol;MOFBPVAC.G.S.X.
0.022e+034At5g36110833607CYP716A1member of CYP716AC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.219e-1271Glycine maxGmaAffx.70962.2.S1_atAW100248--4e-12At5g67420LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)C.G.S.X.
0.075e-857Hordeum vulgareContig8752_atContig8752--1e-7At5g67420LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)C.G.S.X.
0.132e-757Oryza sativaOs07g0589000AK069813.1-Protein of unknown function DUF260 domaincontaining protein1e-7At5g67420LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)C.G.S.X.
0.132e-963Populus trichocarpaPtp.3781.1.S1_atDN498839hypothetical protein-2e-10At3g49940LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38)C.G.S.X.
0.064e-756Triticum aestivumTaAffx.14385.1.S1_atBF200382--5e-7At5g67420LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)C.G.S.X.
0.101e-136Vitis vinifera1610679_atCF604560hypothetical protein LOC100261250-6e-4At4g37540LBD39 (LOB DOMAIN-CONTAINING PROTEIN 39)C.G.S.X.
0.032e-136Zea maysZm.2549.1.A1_atBM336803--2e+1At3g49230unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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