Gene omics information

Query gene ID At5g67210
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g67210836856unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBS.X.H.G.
0.9597.0At2g38080818386IRX12 (IRREGULAR XYLEM 12)Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.S.X.H.G.
0.9597.0At5g15630831417IRX6Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.S.X.H.G.
0.9597.0At5g44030834426CESA4 (CELLULOSE SYNTHASE A4)Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.S.X.H.G.
0.9597.0At5g54690835558GAUT12 (GALACTURONOSYLTRANSFERASE 12)Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).S.X.H.G.
0.9195.6At4g27435828852unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9195.6At4g28500828968ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73)F:transcription factor activity, transcription activator activity;P:multicellular organismal development, regulation of secondary cell wall thickening;C:nucleus;POS.X.H.G.
0.9095.1At5g17420831608IRX3 (IRREGULAR XYLEM 3)Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).S.X.H.G.
0.8894.0At3g16920820947chitinaseF:chitinase activity;P:cell wall macromolecule catabolic process;C:unknown;PBMOFS.X.H.G.
0.8894.0At3g18660821397PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1)Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
202.5100.0GSM131655ATGE_27_AGSE5633AtGenExpress: Developmental series (shoots and stems)
173.9100.0GSM131656ATGE_27_BGSE5633AtGenExpress: Developmental series (shoots and stems)
145.699.9GSM131657ATGE_27_CGSE5633AtGenExpress: Developmental series (shoots and stems)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.704e-180630At3g50220824184unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POBC.G.S.X.
0.028e-342At2g47590819372PHR2 (photolyase/blue-light receptor 2)photolyase/blue light photoreceptor PHR2 (PHR2) mRNA,C.G.S.X.
0.021e-138At4g16790827385hydroxyproline-rich glycoprotein family proteinF:unknown;P:unknown;C:unknown;MPFOBVAC.G.S.X.
0.025e-136At5g37970833776S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:unknown;POBMFC.G.S.X.
0.015e-136At4g18670827601protein binding / structural constituent of cell wallF:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MBPFOVAC.G.S.X.
0.025e-136At3g50870824251MNP (MONOPOLE)mutant has Embryo defect; GATA Factor Transcriptional RegulatorC.G.S.X.
0.025e-136At2g41750818774DTW domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMPOC.G.S.X.
0.015e-136At1g77270844063unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBFC.G.S.X.
0.022e+034At5g595308360722-oxoglutarate-dependent dioxygenase, putativeF:transferase activity, transferring glycosyl groups;P:unknown;C:unknown;POBFMC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.173e-654Glycine maxGma.11522.2.S1_atBG650872--6e-9At3g50220unknown proteinC.G.S.X.
0.029e-134Hordeum vulgareHA10F20u_x_atHA10F20u--4e+0At2g42240nucleic acid binding / nucleotide bindingC.G.S.X.
0.031e-346Oryza sativaOs06g0687600CF196060-Uncharacterized plant-specific domain 01627containing protein8e+0At5g06265hyaluronan mediated motility receptor-relatedC.G.S.X.
0.132e-757Populus trichocarpaPtpAffx.21514.2.S1_s_atCN549302hypothetical protein-2e-7At5g67210unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTa.29551.1.A1_atCA719367--4e-3At5g27520PNC2 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 2)C.G.S.X.
0.042e+032Vitis vinifera1622695_atCF414053hypothetical protein LOC100267469-2e-2At3g63230unknown proteinC.G.S.X.
0.023e+032Zea maysZm.8292.1.S1_atAY106611.1hypothetical protein LOC100275334-6e-15At4g16450unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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