Gene omics information

Query gene ID At5g67180
Gene name AP2 domain-containing transcription factor, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6579.6At5g67180836853AP2 domain-containing transcription factor, putativeF:transcription factor activity, DNA binding;P:multicellular organismal development, response to heat, regulation of transcription, DNA-dependent;C:nucleus;POBVS.X.H.G.
0.5773.8At4g31570829284unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVS.X.H.G.
0.5673.0At5g61940836315ubiquitin carboxyl-terminal hydrolase-relatedF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;OPMFBS.X.H.G.
0.5368.6At5g53200835401TRY (TRIPTYCHON)F:transcription factor activity, DNA binding;P:trichome branching, regulation of transcription;C:unknown;POMS.X.H.G.
0.5368.6At4g31280829255unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5267.4At3g05080819670unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5065.3At1g19060838488unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4963.5At5g37900833769seven in absentia (SINA) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process;C:nucleus, plasma membrane;MPOS.X.H.G.
0.4963.5At2g18200816335unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PS.X.H.G.
0.4963.5At2g02550814785nucleaseF:nuclease activity;P:DNA repair;C:unknown;MFOPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
205.8100.0E-MEXP-1443-raw-cel-1581869573
153.599.9E-MEXP-509-raw-cel-829148420
132.299.9E-MEXP-1443-raw-cel-1581869515
128.299.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
117.599.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
103.099.9GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
99.299.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
98.699.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
98.399.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
97.199.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.347e-62238At4g36920829845AP2 (APETALA 2)Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.C.G.S.X.
0.162e-31137At2g28550817403RAP2.7 (RELATED TO AP2.7)F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent, vegetative to reproductive phase transition;C:nucleus;POBVC.G.S.X.
0.106e-1065At2g39250818510SNZ (SCHNARCHZAPFEN)Encodes a AP2 domain transcription factor that can repress flowering. SNZ and its paralogous gene, SCHLAFMUTZE (SMZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.C.G.S.X.
0.082e-963At5g60120836134TOE2F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POBVC.G.S.X.
0.035e-446At5g47230834770ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.085e-446At3g54990824664SMZ (SCHLAFMUTZE)Encodes a AP2 domain transcription factor that can repress flowering. SMZ and its paralogous gene, SNARCHZAPFEN (SNZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.C.G.S.X.
0.028e-342At5g65510836677AIL7 (AINTEGUMENTA-like 7)F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent;C:nucleus;POBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.194e-30133Glycine maxGma.16514.1.S1_atCD406410--1e-45At4g36920AP2 (APETALA 2)C.G.S.X.
0.024e+032Hordeum vulgareContig19596_atContig19596--1e-1At1g23980zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.073e-757Oryza sativaOs07g0235800AK111874.1-Pathogenesis-related transcriptional factor andERF domain containing protein2e-2At2g28550RAP2.7 (RELATED TO AP2.7)C.G.S.X.
0.221e-20101Populus trichocarpaPtpAffx.219741.1.S1_atpmrna35768AP2 domain-containing transcription factor-9e-29At2g28550RAP2.7 (RELATED TO AP2.7)C.G.S.X.
0.112e-1687Triticum aestivumTa.13336.1.S1_atCK212277apetala2 protein-3e-16At5g67180AP2 domain-containing transcription factor, putativeC.G.S.X.
0.061e-240Vitis vinifera1620170_atCB974375hypothetical protein LOC100246815-1e-4At4g36920AP2 (APETALA 2)C.G.S.X.
0.076e-857Zea maysZm.393.1.S1_atU41466.1glossy15-3e-7At5g67180AP2 domain-containing transcription factor, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
CGO:0007275The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
CGO:0009408A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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