Gene omics information

Query gene ID At5g66960
Gene name prolyl oligopeptidase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6680.1At5g66960836830prolyl oligopeptidase family proteinF:serine-type peptidase activity, serine-type endopeptidase activity;P:proteolysis;C:membrane;OBMPFAVS.X.H.G.
0.3235.7At5g52850835362pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POFMBAS.X.H.G.
0.3032.1At3g23330821914pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMBS.X.H.G.
0.2726.2At3g60040825174F-box family proteinF:nucleic acid binding;P:N-terminal protein myristoylation;C:plasma membrane;POMFBAS.X.H.G.
0.2624.4At1g74600843800pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:chloroplast;POMFBAS.X.H.G.
0.2217.5At1g27880839681ATP-dependent DNA helicase, putativeF:helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:DNA recombination;C:cellular_component unknown;BOMFPVAS.X.H.G.
0.2217.5At3g61360825308pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POFMBAS.X.H.G.
0.2217.5At5g35400833501tRNA pseudouridine synthase family proteinF:pseudouridine synthase activity;P:tRNA processing, pseudouridine synthesis;C:unknown;BOMPAFS.X.H.G.
0.2014.4At1g76170843949ATP bindingF:ATP binding;P:tRNA processing;C:cellular_component unknown;BOAFMPS.X.H.G.
0.1912.7At4g39530830107pentatricopeptide (PPR) repeat-containing proteinF:binding;P:biological_process unknown;C:unknown;POMFBAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
320.9100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
216.3100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
174.7100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
173.1100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
163.099.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
162.899.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
159.199.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
146.899.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
144.099.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
130.199.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.013e-448At3g50130824175unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;MPOFBVAC.G.S.X.
0.011e-346At5g55670835661RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MBOFPVAC.G.S.X.
0.025e-344At1g304752745766-F:molecular_function unknown;P:biological_process unknown;C:unknown;MPBOC.G.S.X.
0.012e-242At4g23890828489unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;OBPMFC.G.S.X.
0.028e-240At4g33660829507unknown proteinF:unknown;P:unknown;C:unknown;MPOFBVAC.G.S.X.
0.018e-240At3g50870824251MNP (MONOPOLE)mutant has Embryo defect; GATA Factor Transcriptional RegulatorC.G.S.X.
0.013e-138At5g57070835811hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBVAC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.013e-242Glycine maxGmaAffx.65020.1.S1_atAW101190--4e-7At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
0.011e-138Hordeum vulgareHV12P19u_atHV12P19u--2e-2At1g72600hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.041e-244Oryza sativaOs.54107.2.S1_at---0C.G.S.X.
0.052e-656Populus trichocarpaPtpAffx.137882.1.S1_atCK091439hypothetical protein-4e-7At5g66960prolyl oligopeptidase family proteinC.G.S.X.
0.023e-138Triticum aestivumTaAffx.3722.2.S1_s_atCA594125--4e-3At2g21060ATGRP2B (GLYCINE-RICH PROTEIN 2B)C.G.S.X.
0.021e+034Vitis vinifera1620940_atCF201899.1--2e+1At5g66990RWP-RK domain-containing proteinC.G.S.X.
0.011e-138Zea maysZm.15105.1.A1_atAI065745--4e+0At5g35100peptidyl-prolyl cis-trans isomeraseC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage