Gene omics information

Query gene ID At5g66890
Gene name disease resistance protein (CC-NBS-LRR class), putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.168.8At5g66890836823disease resistance protein (CC-NBS-LRR class), putativeF:unknown;P:defense response;C:unknown;PMBOFAVS.X.H.G.
0.3338.1At1g01560839523ATMPK11member of MAP KinaseS.X.H.G.
0.1912.7At3g52430824408PAD4 (PHYTOALEXIN DEFICIENT 4)Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling.S.X.H.G.
0.168.8At1g72890843620disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMOS.X.H.G.
0.114.1At4g34390829589XLG2 (extra-large GTP-binding protein 2)F:guanyl nucleotide binding, signal transducer activity;P:in 7 processes;C:nucleus;MFPOBS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
543.1100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
417.9100.0GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
187.8100.0GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attack
109.199.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
107.699.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
82.899.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
81.299.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
76.399.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
75.999.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
66.299.8E-MEXP-546-raw-cel-863289532
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.276e-41169At5g66900836824disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFAVC.G.S.X.
0.182e-32141At5g66910836825disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:endomembrane system;PMBOFAC.G.S.X.
0.022e-448At4g33300829466ADR1-L1 (ADR1-like 1)F:protein binding, ATP binding;P:defense response, apoptosis;C:apoplast;PMBOFAC.G.S.X.
0.022e-138At4g40070830170protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVC.G.S.X.
0.012e-138At1g14740838039unknown proteinF:unknown;P:unknown;C:cellular_component unknown;PMOBFAC.G.S.X.
0.026e-136At5g114126240527nucleic acid binding / nucleotide bindingF:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:endomembrane system;MPFOBC.G.S.X.
0.026e-136At5g21140832240emb1379 (embryo defective 1379)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;MFPOC.G.S.X.
0.016e-136At5g51500835224pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMOC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Glycine maxGmaAffx.81029.1.A1_atBE658920--3e+0At3g45242CPuORF61 (Conserved peptide upstream open reading frame 61)C.G.S.X.
0.021e+034Hordeum vulgareContig1361_atContig1361--3e-1At4g02340epoxide hydrolase, putativeC.G.S.X.
0.021e+036Oryza sativaOs10g0124000AK121991.1-NHP2-like protein 1 (High mobility group-likenuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5kDa protein) (OTK27) (Fragment)7e-15At5g20160ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinC.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.35394.1.S1_atDN502842--8e-1At1g6000029 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putativeC.G.S.X.
0.026e-136Triticum aestivumTaAffx.91829.1.S1_atBJ301177--1e-1At3g11773electron carrier/ protein disulfide oxidoreductaseC.G.S.X.
0.027e-134Vitis vinifera1617433_atCD802035hypothetical protein LOC100246316-4e-3At1g04040acid phosphatase class B family proteinC.G.S.X.
0.024e+032Zea maysZm.7094.2.S1_atCA40370960S ribosomal protein L7a-3e-80At3g6287060S ribosomal protein L7A (RPL7aB)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage