Gene omics information

Query gene ID At5g66760
Gene name SDH1-1
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At5g66760836809SDH1-1One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex.S.X.H.G.
0.5065.3At3g24170822003ATGR1 (glutathione-disulfide reductase)Encodes a cytosolic glutathione reductase.S.X.H.G.
0.2217.5At1g24180839031IAR4Arabidopsis thaliana pyruvate dehydrogenase E1a-like subunit. 81% identical to a previously characterized Arabidopsis mitochondrial PDH E1a-subunit, At1g59900S.X.H.G.
0.135.8At3g09810820139isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativeF:isocitrate dehydrogenase (NAD+) activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;P:tricarboxylic acid cycle, metabolic process;C:mitochondrion;BOMFAPS.X.H.G.
0.103.4At3g27380822359SDH2-1One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.599.7GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
26.999.7GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
26.299.7GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
26.199.7GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
25.699.7GSM184931Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
23.799.6GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
22.699.6GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
20.999.6GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
16.999.5GSM184933Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
15.399.4E-MEXP-475-raw-cel-680982503
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.760910At2g18450816359SDH1-2Nuclear encoded mitochondrial flavoprotein subunit of succinate dehydrogenase complex .C.G.S.X.
0.014e-344At3g54670824632TTN8 (TITAN8)cohesinC.G.S.X.
0.012e-138At5g11860831059NLI interacting factor (NIF) family proteinF:phosphatase activity;P:biological_process unknown;C:chromosome, centromeric region, chromosome, nucleus;MOFPBVC.G.S.X.
0.019e-136At4g00570828222malate oxidoreductase, putativeF:oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity, ATP binding;P:oxidation reduction, malate metabolic process, metabolic process;C:mitochondrion, chloroplast;BOMPFAC.G.S.X.
0.019e-136At3g61360825308pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POFMBAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.600674Glycine maxGma.17145.2.S1_atCD396752--0At2g18450SDH1-2C.G.S.X.
0.550676Hordeum vulgareContig3477_atContig3477--0At5g66760SDH1-1C.G.S.X.
0.542e-163577Oryza sativaOs07g0134800AK065901.1-Succinate dehydrogenase or fumarate reductase,flavoprotein subunit family protein1e-86At2g18450SDH1-2C.G.S.X.
0.670890Populus trichocarpaPtpAffx.225687.1.S1_atpmrna45221hypothetical protein-0At5g66760SDH1-1C.G.S.X.
0.539e-180630Triticum aestivumTa.3416.1.S1_atCA632297--1e-179At5g66760SDH1-1C.G.S.X.
0.425e-89327Vitis vinifera1610760_atCF211090hypothetical protein LOC100254718-1e-88At5g66760SDH1-1C.G.S.X.
0.542e-142506Zea maysZm.16820.1.S1_atAW256125hypothetical protein LOC100279930-9e-60At2g18450SDH1-2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0006121The transfer of electrons from succinate to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex II.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00150Link to KaPPA-View 4TCA cycle



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00020Link to KEGG PATHWAYCitrate cycle (TCA cycle)
00190Link to KEGG PATHWAYOxidative phosphorylation
01061Link to KEGG PATHWAYBiosynthesis of phenylpropanoids
01062Link to KEGG PATHWAYBiosynthesis of terpenoids and steroids
01063Link to KEGG PATHWAYBiosynthesis of alkaloids derived from shikimate pathway
01064Link to KEGG PATHWAYBiosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
01065Link to KEGG PATHWAYBiosynthesis of alkaloids derived from histidine and purine
01066Link to KEGG PATHWAYBiosynthesis of alkaloids derived from terpenoid and polyketide
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
01100Link to KEGG PATHWAYMetabolic pathways
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