Gene omics information

Query gene ID At5g66490
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g66490836781unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PS.X.H.G.
0.5873.8At5g13180831157ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PS.X.H.G.
0.5065.3At3g03000821161calmodulin, putativeCalmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent mannerS.X.H.G.
0.4963.5At1g80180844358unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PS.X.H.G.
0.4558.3At4g20260827773DREPP plasma membrane polypeptide family proteinEncodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels.S.X.H.G.
0.4457.2At4g05150825863octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBS.X.H.G.
0.4355.3At1g15400838110unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;POBS.X.H.G.
0.4355.3At5g61640836286PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1)ubiquitous enzyme that repairs oxidatively damaged proteinsS.X.H.G.
0.4355.3At4g02370828057unknown proteinF:unknown;P:biological_process unknown;C:plasma membrane, vacuole;POS.X.H.G.
0.4355.3At4g05590825927unknown proteinF:unknown;P:biological_process unknown;C:mitochondrion;MFPOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.299.8GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
32.899.7GSM268245dor-drought-1, biological rep 1GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
26.699.7GSM268247WT-drought-1, biological rep 1GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
21.699.6E-ATMX-32-raw-cel-1562974681
19.699.6E-ATMX-32-raw-cel-1562974409
18.499.5E-ATMX-32-raw-cel-1562974595
17.499.5E-ATMX-31-raw-cel-1516948001
17.099.5GSM142827PJ002_ATH1_A8-jarvis-B1798GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypes
16.999.5GSM2454759 hr Hypoxia Stress 1 hr recovery IP RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
15.299.4E-ATMX-32-raw-cel-1562974621
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.196e-444At3g50900824254unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.012e-136At4g29900829112ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.C.G.S.X.
0.012e-136At1g31710840058copper amine oxidase, putativeF:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAC.G.S.X.
0.056e-134At5g26800832738unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.026e-134At5g05520830435outer membrane OMP85 family proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, plastid;BOMFPVC.G.S.X.
0.036e-134At4g26130828719unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOFC.G.S.X.
0.016e-134At3g06620819841protein kinase family proteinF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent;C:unknown;MPOBFVAC.G.S.X.
0.016e-134At3g06640819844protein kinase family proteinF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent;C:unknown;MPOBFVAC.G.S.X.
0.016e-134At3g06630819842protein kinase family proteinF:two-component sensor activity, protein serine/threonine kinase activity, protein kinase activity, signal transducer activity, ATP binding;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay);C:unknown;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-136Glycine maxGmaAffx.78677.2.S1_atBQ740303--8e-1At1g48912unknown proteinC.G.S.X.
0.055e+030Hordeum vulgareEBro08_SQ009_J21_atEBro08_SQ009_J21--8e-1At3g19090RNA-binding protein, putativeC.G.S.X.
0.048e-238Oryza sativaOs07g0216100AK107820.1-Hypothetical protein9e-2At5g66490unknown proteinC.G.S.X.
0.102e-550Populus trichocarpaPtpAffx.207373.1.S1_atpmrna14625hypothetical protein-1e-5At5g66490unknown proteinC.G.S.X.
0.056e-134Triticum aestivumTa.15445.1.S1_atCA484790--7e-1At5g66490unknown proteinC.G.S.X.
0.047e-132Vitis vinifera1617086_atCF513777--4e+0At5g66490unknown proteinC.G.S.X.
0.053e-134Zea maysZm.13556.1.A1_atAY108151.1--9e-1At5g66490unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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