Gene omics information

Query gene ID At5g66470
Gene name GTP binding / RNA binding
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g66470836779GTP binding / RNA bindingF:RNA binding, GTP binding;P:unknown;C:chloroplast;BOMAPFS.X.H.G.
0.7989.1At3g62910825466APG3 (ALBINO AND PALE GREEN)Isolated in a screen for chloroplast development mutants. Pale green, albino seedlings arrest early in seedling development.S.X.H.G.
0.7385.5At5g55220835615trigger factor type chaperone family proteinF:peptidyl-prolyl cis-trans isomerase activity;P:protein folding, protein transport;C:chloroplast, chloroplast stroma, chloroplast envelope;BOMPFVS.X.H.G.
0.7385.5At5g03940830273CPSRP54 (CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT)mutant has Yellow first leaves; Chloroplast Signal Recognition Particle SubunitS.X.H.G.
0.7284.8At2g24060816940translation initiation factor 3 (IF-3) family proteinF:translation initiation factor activity;P:translational initiation;C:chloroplast;OBMPFVAS.X.H.G.
0.7184.2At5g10690830933pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing proteinF:unknown;P:biological_process unknown;C:chloroplast;POMFBAS.X.H.G.
0.6982.9At2g37660818343binding / catalytic/ coenzyme bindingF:coenzyme binding, binding, catalytic activity;P:defense response to bacterium;C:thylakoid, apoplast, chloroplast stroma, chloroplast;BOPFAMS.X.H.G.
0.6680.1At2g47940819406DEGP2Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.S.X.H.G.
0.6680.1At5g18660831984PCB2 (PALE-GREEN AND CHLOROPHYLL B REDUCED 2)Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll.S.X.H.G.
0.6579.6At5g63310836451NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.499.6GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
13.099.4GSM318331EL_14DAS_2GSE12676Arabidopsis thaliana Ler developmental series
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.014e-240At4g190108276394-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinF:4-coumarate-CoA ligase activity;P:metabolic process;C:unknown;BOFMPAVC.G.S.X.
0.016e-136At3g51560824319ATP binding / protein binding / transmembrane receptorF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFVAC.G.S.X.
0.036e-136At2g26930817234ATCDPMEK (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE)Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase.C.G.S.X.
0.016e-136At1g63670842671unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBFAVC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.354e-43176Glycine maxGmaAffx.1815.2.S1_atAW201478--1e-43At5g66470GTP binding / RNA bindingC.G.S.X.
0.021e+034Hordeum vulgareHK05M14r_atHK05M14r--6e+0At1g15950CCR1 (CINNAMOYL COA REDUCTASE 1)C.G.S.X.
0.194e-1377Oryza sativaOs05g0567300AK112068.1-GTP-binding protein Era family protein2e-13At5g66470GTP binding / RNA bindingC.G.S.X.
0.576e-82305Populus trichocarpaPtpAffx.207374.1.S1_atpmrna14628hypothetical protein-4e-82At5g66470GTP binding / RNA bindingC.G.S.X.
0.027e-136Triticum aestivumTaAffx.113000.1.S1_atCA619022--4e+0At5g01390DNAJ heat shock protein, putativeC.G.S.X.
0.027e-134Vitis vinifera1616254_a_atCF210000hypothetical protein LOC100261951-1e+0At3g52800zinc finger (AN1-like) family proteinC.G.S.X.
0.024e+032Zea maysZm.13056.1.A1_atCA403911hypothetical protein LOC100273702-3e-1At5g40540protein kinase, putativeC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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