Gene omics information

Query gene ID At5g66380
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9296.0At5g66380836770ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1)Encodes a folate transporter that is located in the chloroplast envelope and is able to mediate exogenous folate uptake when expressed in E. coli. However, this is not the sole folate transporter for chloroplasts as null mutants of this gene have no discernible phenotype when grown under folate-sufficient conditions and contained wild-type levels of folates in leaves.S.X.H.G.
0.5166.3At1g30825839965DIS2 (DISTORTED TRICHOMES 2)Involved in trichome maturation. mutant displays enlarged trichomesS.X.H.G.
0.4862.5At3g24570822053peroxisomal membrane 22 kDa family proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, integral to membrane, peroxisomal membrane;MFPOS.X.H.G.
0.4761.2At3g51610824324unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;POS.X.H.G.
0.4457.2At5g10870830954ATCM2 (chorismate mutase 2)Encodes chorismate mutase AtCM2.S.X.H.G.
0.4457.2At5g46750834718AGD9 (ARF-GAP DOMAIN 9)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.S.X.H.G.
0.4253.9At5g11810831054unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.4253.9At5g43940834417HOT5 (sensitive to hot temperatures 5)Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.S.X.H.G.
0.4050.8At2g44525819060unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;BMOFPS.X.H.G.
0.4050.8At1g10430837583PP2A-2Encodes one of two isoforms of the catalytic subunit of protein phosphatase 2A.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
47.299.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
46.599.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
42.299.8GSM133758Lindsey_1-11_heart-stage-root_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
41.099.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
33.999.7GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.017e-342At3g48770824038ATP binding / DNA bindingF:DNA binding, ATP binding;P:biological_process unknown;C:chloroplast;PMBOFAC.G.S.X.
0.021e-138At1g28690839769pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBAC.G.S.X.
0.015e-136At5g11240830994transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:endomembrane system;BMFOPAC.G.S.X.
0.025e-136At5g07320830623mitochondrial substrate carrier family proteinF:binding, calcium ion binding;P:transport;C:mitochondrial inner membrane, membrane;MFPOBVC.G.S.X.
0.025e-136At3g60410825212unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOC.G.S.X.
0.022e+034At5g59520836071ZIP2encodes a metal ion transporter whose expression is regulated by copper.C.G.S.X.
0.012e+034At4g22990828398SPX (SYG1/Pho81/XPR1) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BFOPMAC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-963Glycine maxGmaAffx.87944.1.S1_atBU090734--1e-9At5g66380ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1)C.G.S.X.
0.039e-134Hordeum vulgareContig22852_atContig22852--6e-1At5g24250unknown proteinC.G.S.X.
0.132e-448Oryza sativaOs03g0734700AK072060.1-Mitochondrial carrier protein family protein2e-4At5g66380ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1)C.G.S.X.
0.441e-1791Populus trichocarpaPtpAffx.207387.1.S1_atpmrna14656hypothetical protein-7e-34At5g66380ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1)C.G.S.X.
0.032e+034Triticum aestivumTaAffx.58914.1.S1_atBQ161595--5e-2At4g20420tapetum-specific protein-relatedC.G.S.X.
0.022e+032Vitis vinifera1614034_atCF205708.1hypothetical protein LOC100255020-4e-13At3g21670nitrate transporter (NTP3)C.G.S.X.
0.035e-238Zea maysZmAffx.853.1.A1_atAI770653--2e-1At3g06130heavy-metal-associated domain-containing proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0015884The directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines.
CGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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