Gene omics information

Query gene ID At5g66110
Gene name metal ion binding
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g66110836743metal ion bindingF:metal ion binding;P:metal ion transport;C:plasma membrane;PFMS.X.H.G.
0.9296.0At5g45310834567unknown proteinF:unknown;P:unknown;C:endomembrane system;OMVBFPAS.X.H.G.
0.8994.6At3g61040825276CYP76C7encodes a protein with cytochrome P450 domainS.X.H.G.
0.8793.5At4g02280828081SUS3 (sucrose synthase 3)Encodes a protein with sucrose synthase activity (SUS3).S.X.H.G.
0.8793.5At5g43770834399proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MBPOFVAS.X.H.G.
0.8793.5At1g75490843885DNA binding / transcription factorencodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.S.X.H.G.
0.8693.1At3g22500821821ATECP31late embryogenesis abundant (LEA) proteinS.X.H.G.
0.8592.4At5g607608361972-phosphoglycerate kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBAFVS.X.H.G.
0.8592.4At5g55750835669hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVAS.X.H.G.
0.8592.4At2g42000818800plant EC metallothionein-like family 15 proteinF:zinc ion binding;P:biological_process unknown;C:unknown;PMOBFS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
839.0100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
337.9100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
304.3100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
210.6100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
205.3100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
199.0100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
175.9100.0GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
175.9100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
172.2100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
152.999.9GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.144e-961At4g38580830015ATFP6 (FARNESYLATED PROTEIN 6)putative farnesylated protein (At4g38580) mRNA, completeC.G.S.X.
0.035e-238At3g26710822283CCB1 (COFACTOR ASSEMBLY OF COMPLEX C)F:molecular_function unknown;P:cytochrome b6f complex assembly;C:chloroplast;OBPC.G.S.X.
0.018e-134At4g12460826858ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOPC.G.S.X.
0.018e-134At3g23900821973RNA recognition motif (RRM)-containing proteinF:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.038e-134At1g01560839523ATMPK11member of MAP KinaseC.G.S.X.
0.058e-134At1g64105842715ANAC027 (Arabidopsis NAC domain containing protein 27)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.281e-1273Glycine maxGma.1397.1.S1_a_atCD408242--6e-24At4g38580ATFP6 (FARNESYLATED PROTEIN 6)C.G.S.X.
0.115e-1063Hordeum vulgareContig11751_atContig11751--1e-4At4g38580ATFP6 (FARNESYLATED PROTEIN 6)C.G.S.X.
0.191e-1377Oryza sativaOs03g0156600AK105367.1-Heavy metal transport/detoxification proteindomain containing protein1e-13At5g66110metal ion bindingC.G.S.X.
0.142e-550Populus trichocarpaPtpAffx.221958.1.S1_atpmrna39091hypothetical protein-2e-5At5g66110metal ion bindingC.G.S.X.
0.112e-446Triticum aestivumTa.4941.1.S1_atBT009077.1--5e-4At5g66110metal ion bindingC.G.S.X.
0.143e-1683Vitis vinifera1608337_atBQ792532hypothetical protein LOC100260571-2e-15At5g66110metal ion bindingC.G.S.X.
0.206e-959Zea maysZm.10202.1.A1_atAY112463.1farnesylated protein 1-3e-8At5g66110metal ion bindingC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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