Gene omics information

Query gene ID At5g65950
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5773.8At5g65950836725unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPS.X.H.G.
0.7586.9At4g24840828587-F:molecular_function unknown;P:protein transport, Golgi organization;C:vacuole;MFOPS.X.H.G.
0.7184.2At5g63840836504RSW3 (RADIAL SWELLING 3)radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.S.X.H.G.
0.6781.6At4g34450829596coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putativeF:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:chloroplast, membrane;MFOPBS.X.H.G.
0.6781.6At5g61970836318signal recognition particle-related / SRP-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBAS.X.H.G.
0.5065.3At2g21390816678coatomer protein complex, subunit alpha, putativeF:protein binding, structural molecule activity, transporter activity;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPI vesicle coat, CUL4 RING ubiquitin ligase complex, membrane;MFOBPAS.X.H.G.
0.5065.3At3g26370822241unknown proteinF:unknown;P:unknown;C:Golgi apparatus;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.799.4GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
8.999.0GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
7.498.8GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
7.398.8GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
6.898.7GSM142662MB002_ATH1_A2-Eland-ch2GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
6.898.7GSM133726McCormac_1-4_wildtype-NFtreated_Rep2_ATH1GSE5726Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplasts
6.898.7GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
6.498.6GSM265429Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
6.498.6GSM133978Birnbaum_1-8_StageII-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis root
5.998.5GSM133979Birnbaum_1-9_StageII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-140At5g404516241415unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPVAC.G.S.X.
0.011e-140At3g49220824083pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMC.G.S.X.
0.015e-138At5g64860836609DPE1 (DISPROPORTIONATING ENZYME)Encodes a maltotriose-metabolizing enzyme with chloroplastic α-1,4-glucanotransferase activity. Mutant has altered starch degradation.C.G.S.X.
0.005e-138At5g40450834043unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast, plasma membrane;MOBFPAVC.G.S.X.
0.015e-138At3g19870821524bindingF:binding;P:biological_process unknown;C:cellular_component unknown;MOPC.G.S.X.
0.015e-138At3g29140822562unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.015e-138At2g35640818133hydroxyproline-rich glycoprotein family proteinF:transcription factor activity;P:regulation of transcription;C:unknown;PMFOBVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.016e-138Glycine maxGmaAffx.86006.1.S1_atBE346856--9e-2At2g31600unknown proteinC.G.S.X.
0.012e-138Hordeum vulgareContig8614_atContig8614--1e-14At2g18750calmodulin-binding proteinC.G.S.X.
0.031e-244Oryza sativaOs02g0714500AK066821.1-TPR-like domain containing protein8e-3At5g65950unknown proteinC.G.S.X.
0.161e-20103Populus trichocarpaPtpAffx.210095.1.S1_atpmrna19883hypothetical protein-9e-21At5g65950unknown proteinC.G.S.X.
0.035e-138Triticum aestivumTa.30319.1.S1_atCA728280--7e-2At5g65950unknown proteinC.G.S.X.
0.042e-1377Vitis vinifera1622030_atCB343775hypothetical protein LOC100265343-7e-14At5g65950unknown proteinC.G.S.X.
0.013e+034Zea maysZmAffx.997.1.S1_atAI857164--3e+0At5g25990unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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