Gene omics information

Query gene ID At5g65800
Gene name ACS5 (ACC SYNTHASE 5)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6075.7At5g65800836709ACS5 (ACC SYNTHASE 5)1-aminocyclopropane-1-carboxylate synthase (ACS) is encoded by a multigene family consisting of at least five members whose expression is induced by hormones, developmental signals, and protein synthesis inhibition.S.X.H.G.
0.4050.8At4g10240826615zinc finger (B-box type) family proteinF:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POMS.X.H.G.
0.3643.6At3g12820820464AtMYB10 (myb domain protein 10)Member of the R2R3 factor gene family.S.X.H.G.
0.030.6At5g37950833774transferase, transferring hexosyl groupsF:transferase activity, transferring hexosyl groups;P:metabolic process;C:unknown;PMVFOBS.X.H.G.
0.010.2At1g62440842542LRX2 (LEUCINE-RICH REPEAT/EXTENSIN 2)encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
257.1100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
218.3100.0GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
198.0100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
189.6100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
179.1100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
167.0100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
162.699.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
161.199.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
160.499.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
156.699.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8401041At3g49700824132ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. Mutants produce elevated levels of ethylene as etiolated seedlings.C.G.S.X.
0.396e-23109At4g37770829933ACS8Encodes an auxin inducible ACC synthase.C.G.S.X.
0.292e-1687At2g22810816812ACS4 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4)key regulatory enzyme in the biosynthesis of the plant hormone ethylene. ACS4 is specifically induced by indoleacetic acid (IAA).C.G.S.X.
0.135e-1479At4g08040826317ACS11encodes an aminotransferase that belongs to ACC synthase gene family structurallyC.G.S.X.
0.058e-756At1g01480837082ACS2a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.C.G.S.X.
0.081e-552At4g26200828726ACS7Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.C.G.S.X.
0.072e-448At3g61510825324ACS1 (ACC SYNTHASE 1)Encodes a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. The gene is transcriptionally active but enzymatically inactive. The predicted amino-acid sequence of ACS1 is missing the highly conserved tripeptide, Thr-Asn-Pro (TNP), between Ile204 and Ser205. Introduction of TNP into ACS1 restores the ACS activity.C.G.S.X.
0.067e-446At4g11280826730ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6)encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene familyC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+036Glycine maxHgAffx.16999.1.S1_atCB824750--2e+0At5g24316proline-rich family proteinC.G.S.X.
0.013e-136Hordeum vulgareContig6579_atContig6579--8e-9At4g21110G10 family proteinC.G.S.X.
0.051e+036Oryza sativaOs03g0727600M96672.1-1-aminocyclopropane-1-carboxylate synthase 1 (EC4.4.1.14) (ACC synthase 1) (S-adenosyl-L-methioninemethylthioadenosine-lyase 1)1e+0At5g65800ACS5 (ACC SYNTHASE 5)C.G.S.X.
0.223e-1687Populus trichocarpaPtpAffx.211419.1.S1_atpmrna223761-aminocyclopropane-1-carboxylate-1e-30At3g49700ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)C.G.S.X.
0.027e-136Triticum aestivumTa.8414.2.S1_atBQ161862--2e-1At5g4152040S ribosomal protein S10 (RPS10B)C.G.S.X.
0.023e+032Vitis vinifera1607569_atCD797554hypothetical protein LOC100241733-2e-1At5g18130unknown proteinC.G.S.X.
0.025e+032Zea maysZm.4403.1.S1_atAY111276.1hypothetical protein LOC100279045-5e+0At5g16400ATF2C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009693The chemical reactions and pathways resulting in the formation of ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.
XGO:0009735A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00030Link to KaPPA-View 4Ethylene biosynthesis from methionine



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00270Link to KEGG PATHWAYCysteine and methionine metabolism
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage