Gene omics information

Query gene ID At5g65500
Gene name ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ ubiquitin-protein ligase
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8994.6At5g65500836676ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ ubiquitin-protein ligaseF:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:ubiquitin ligase complex;PMOBFVAS.X.H.G.
0.7586.9At3g45420823680lectin protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:mitochondrion;MPOBFVAS.X.H.G.
0.6176.7At5g59260836044lectin protein kinase, putativeF:protein serine/threonine kinase activity, sugar binding, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.5773.8At3g13840820596scarecrow transcription factor family proteinF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PBS.X.H.G.
0.4457.2At1g18860838467WRKY61member of WRKY Transcription Factor; Group II-bS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
344.7100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
313.5100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
278.2100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
261.8100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
258.5100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
248.1100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
243.2100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
242.5100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
234.0100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
233.6100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.022e-242At1g66620842980seven in absentia (SINA) protein, putativeF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process;C:nucleus;MOFPBVAC.G.S.X.
0.022e-242At1g02540839516unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFVBPAC.G.S.X.
0.027e-240At2g30280817578unknown proteinF:unknown;P:unknown;C:cellular_component unknown;MBOFPVAC.G.S.X.
0.017e-240At2g26550817196HO2 (HEME OXYGENASE 2)encodes a heme oxygenase that catalyzes the oxidation of heme to biliverdin IXalpha, CO and Fe(2+), a committed step in the biosynthesis of the phytochrome chromophore phytochromobilin.C.G.S.X.
0.027e-240At2g45920819200U-box domain-containing proteinF:ubiquitin-protein ligase activity;P:protein ubiquitination;C:ubiquitin ligase complex;POMFBAVC.G.S.X.
0.017e-240At1g74180843758AtRLP14 (Receptor Like Protein 14)F:protein binding;P:signal transduction;C:chloroplast;PMOBFAVC.G.S.X.
0.017e-240At1g55110841954AtIDD7 (Arabidopsis thaliana Indeterminate(ID)-Domain 7)F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MOPFC.G.S.X.
0.017e-240At1g68940843228armadillo/beta-catenin repeat protein-related / U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;POMBFVC.G.S.X.
0.017e-240At1g67140843034SWEETIE (SWEETIE)F:binding;P:trehalose metabolic process, carbohydrate metabolic process, starch metabolic process;C:cytosol;MOBFPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-861Glycine maxGmaAffx.6262.1.S1_atBU550379--5e-9At5g65500ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ ubiquitin-protein ligaseC.G.S.X.
0.024e-240Hordeum vulgareHVSMEl0003G02r2_atHVSMEl0003G02r2--1e-3At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)C.G.S.X.
0.021e-140Oryza sativaOs09g04960009637.m02815--2e-1At3g06000leucine-rich repeat family proteinC.G.S.X.
0.077e-963Populus trichocarpaPtpAffx.207419.1.S1_atpmrna14722hypothetical protein-5e-9At5g65500ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ ubiquitin-protein ligaseC.G.S.X.
0.028e-240Triticum aestivumTa.7215.2.S1_atBJ317345--1e-4At5g40630ubiquitin family proteinC.G.S.X.
0.026e-342Vitis vinifera1621263_atCA818600hypothetical protein LOC100267999-3e-8At2g45910protein kinase family protein / U-box domain-containing proteinC.G.S.X.
0.015e-136Zea maysZm.15925.1.S1_atAI395987--2e+0At1g54215proline-rich family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
LGO:0016567The process by which one or more ubiquitin moieties are added to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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