Gene omics information

Query gene ID At5g65390
Gene name AGP7
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.146.8At5g65390836664AGP7F:unknown;P:unknown;C:anchored to membrane;BMOPFVAS.X.H.G.
0.5773.8At2g19660816485DC1 domain-containing proteinF:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOS.X.H.G.
0.5065.3At5g37790833757protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.4457.2At1g27670839659unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4457.2At4g14380827082unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
98.299.9GSM184518Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
55.499.8GSM226537L7SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
53.699.8GSM184517Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
47.699.8GSM226536L6SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
38.699.8GSM134519Col-0_4day_red illumination_+lincomycin_rep1GSE5759red illumination w/o lincomycin
36.599.7GSM134518Col-0_4day_red illumination_-lincomycin_rep2GSE5759red illumination w/o lincomycin
34.799.7GSM134520Col-0_4day_red illumination _+lincomycin_rep2GSE5759red illumination w/o lincomycin
32.899.7GSM131174AtGen_D-6_1-AL_REP1_ATH1GSE5617AtGenExpress: Light treatments
32.499.7GSM131211AtGen_D-45_3-BS_REP3_ATH1GSE5617AtGenExpress: Light treatments
31.599.7GSM131171AtGen_D-3_1-PL_REP1_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.258e-444At5g10430830907AGP4 (ARABINOGALACTAN PROTEIN 4)Encodes arabinogalactan-protein (AGP4).C.G.S.X.
0.032e-136At5g14970831349unknown proteinF:unknown;P:unknown;C:unknown;BOPC.G.S.X.
0.022e-136At4g34440829595protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVAC.G.S.X.
0.022e-136At3g14180820635transcription factorF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;POMFC.G.S.X.
0.022e-136At1g77120844047ADH1 (ALCOHOL DEHYDROGENASE 1)Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.C.G.S.X.
0.017e-134At5g38560833844protein kinase family proteinF:structural constituent of cell wall, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MBOFPVAC.G.S.X.
0.017e-134At3g46730823826disease resistance protein (CC-NBS class), putativeF:ATP binding;P:defense response, apoptosis;C:endomembrane system;PMBOFAC.G.S.X.
0.037e-134At3g58200824989meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFC.G.S.X.
0.017e-134At3g55200824686splicing factor, putativeF:nucleic acid binding;P:biological_process unknown;C:nucleus, chloroplast;MFOPBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Glycine maxPsAffx.CL452Contig1_atPsAffx.CL452Contig1--8e-1At5g65390AGP7C.G.S.X.
0.034e-134Hordeum vulgareContig20523_atContig20523--1e+0At5g65390AGP7C.G.S.X.
0.054e-136Oryza sativaOsAffx.26600.1.S1_at---0C.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.50946.5.S1_atDN501009--2e-1At5g65390AGP7C.G.S.X.
0.058e-444Triticum aestivumTaAffx.4463.1.S1_atCA740979--1e-3At5g65390AGP7C.G.S.X.
0.059e-132Vitis vinifera1617028_atAY037922.1--7e+0At5g35066unknown proteinC.G.S.X.
0.033e-134Zea maysZm.1665.1.A1_atAW355870--3e-1At5g28800unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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