Gene omics information

Query gene ID At5g65210
Gene name TGA1
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3439.8At5g65210836646TGA1F:transcription factor activity, calmodulin binding, DNA binding;P:defense response to bacterium;C:nucleus;POMS.X.H.G.
0.8391.4At3g09220820078LAC7 (laccase 7)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).S.X.H.G.
0.6176.7At3g01420821135DOX1Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.S.X.H.G.
0.5773.8At2g44010819006unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5773.8At5g22890832353zinc finger (C2H2 type) family proteinF:transcription factor activity;P:response to chitin, regulation of transcription;C:intracellular;MOPFS.X.H.G.
0.4761.2At5g63600836480FLS5 (FLAVONOL SYNTHASE 5)encodes a protein whose sequence is similar to flavonol synthaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.499.7GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
34.599.7GSM291024root - 08% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
29.499.7GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
26.899.7GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
26.399.7GSM131465AtGen_6-9521_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)
26.199.7GSM131469AtGen_6-9621_Heatstress(3h)+21hrecovery-Roots-24.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)
24.399.6GSM290758root - 01% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
24.199.6GSM179969Arabidopsis aux1 mutant roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
24.099.6GSM131470AtGen_6-9622_Heatstress(3h)+21hrecovery-Roots-24.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)
23.999.6GSM131466AtGen_6-9522_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.740660At5g10030830866TGA4 (TGACG MOTIF-BINDING FACTOR 4)Encodes a member of basic leucine zipper transcription gene family. Nomenclature according to Xiang, et al. (1997).C.G.S.X.
0.052e-1273At1g68640843194PAN (PERIANTHIA)Encodes bZIP-transcription factor. Mutant plants have extra floral organs.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.103e-654Glycine maxGma.46.1.S1_atL28005.1bZIP transcription factor bZIP52 /// transcription factor bZIP76-4e-6At5g10030TGA4 (TGACG MOTIF-BINDING FACTOR 4)C.G.S.X.
0.042e-1169Hordeum vulgareContig5909_atContig5909--4e-12At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
0.043e-448Oryza sativaOs04g0637000AK066906.1-Basic leucine zipper protein (Liguleless2)4e-4At5g65210TGA1C.G.S.X.
0.104e-1273Populus trichocarpaPtpAffx.5626.1.A1_atCV261500hypothetical protein-4e-17At1g22070TGA3C.G.S.X.
0.039e-342Triticum aestivumTa.808.1.S1_atBJ217235HBP-1b-2e-5At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
0.022e-136Vitis vinifera1611575_atCB004035--2e-45At1g16270protein kinase family proteinC.G.S.X.
0.024e+032Zea maysZm.12366.1.S1_atCA826895--1e+1At4g32590ferredoxin-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0042742Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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