Gene omics information

Query gene ID At5g64850
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9597.0At5g64850836608unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PS.X.H.G.
0.2319.3At4g26860828793pyridoxal phosphate bindingF:pyridoxal phosphate binding;P:biological_process unknown;C:unknown;OBMFPAS.X.H.G.
0.1710.2At5g64460836567-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FOPBMS.X.H.G.
0.124.9At2g31070817659TCP10 (TCP DOMAIN PROTEIN 10)TCP family protein involved in heterchronic regulation of leaf differentiation.S.X.H.G.
0.103.4At5g02120831799OHP (ONE HELIX PROTEIN)Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions.S.X.H.G.
0.092.8At1g06040837113STO (SALT TOLERANCE)Encodes salt tolerance protein (STO) which confers salt tolerance to yeast cells. Fully complements calcineurin deficient yeast but does not encode a phosphoprotein phosphatase. Sequence has similarities to CONSTANS. STO co-localizes with COP1 and plays a role in light signaling.S.X.H.G.
0.061.4At4g35450829697AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2)Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.S.X.H.G.
0.040.9At4g25050828608ACP4 (acyl carrier protein 4)encodes an acyl carrier protein predominantly expressed in leaves. Gene expression is upregulated by light.S.X.H.G.
0.040.9At1g60950842386FED Aencodes a major leaf ferredoxinS.X.H.G.
0.030.6At1g22140838819unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.199.7GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
25.099.6GSM131416AtGen_6-8112_Woundingstress-Shoots-0.5h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)
23.999.6GSM131415AtGen_6-8111_Woundingstress-Shoots-0.5h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)
20.199.6GSM62699arf6/arf6 ARF8/arf8 flowers_stage 11-12GSE2848Auxin Response Factor mediated flower gene expression
19.999.6GSM131589ATGE_35_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
18.399.5GSM131588ATGE_35_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
18.099.5GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
16.099.5GSM62696Columbia flowers_stage 13-14GSE2848Auxin Response Factor mediated flower gene expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.666e-29127At5g09960830857unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PC.G.S.X.
0.043e-342At5g62290836350nucleotide-sensitive chloride conductance regulator (ICln) family proteinF:ion channel activity;P:cell volume homeostasis, chloride transport;C:cellular_component unknown;MPFOC.G.S.X.
0.021e-240At5g60710836192zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:plasma membrane;BMOPFAC.G.S.X.
0.014e-238At1g642552745850SWIM zinc finger family proteinF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.012e-136At2g41620818760nucleoporin interacting component family proteinF:molecular_function unknown;P:transport;C:nucleolus;MFPOC.G.S.X.
0.016e-134At5g07390830630ATRBOHA (respiratory burst oxidase homolog A)F:calcium ion binding;P:defense response;C:intrinsic to plasma membrane;MFPOBAC.G.S.X.
0.026e-134At4g15880827269ESD4 (EARLY IN SHORT DAYS 4)EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.C.G.S.X.
0.026e-134At4g327103770575ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.096e-238Glycine maxGma.10696.1.S1_atBI970314--1e-1At5g64850unknown proteinC.G.S.X.
0.041e+032Hordeum vulgareHV_CEa0014H05r2_atHV_CEa0014H05r2--3e+0At5g64850unknown proteinC.G.S.X.
0.063e-136Oryza sativaOs03g0169900AK063222.1-Conserved hypothetical protein4e-1At5g64850unknown proteinC.G.S.X.
0.126e-857Populus trichocarpaPtpAffx.50349.1.A1_atCV269995hypothetical protein-1e-7At5g64850unknown proteinC.G.S.X.
0.047e-134Triticum aestivumTa.9116.3.A1_atBG906296--8e-1At5g64850unknown proteinC.G.S.X.
0.078e-442Vitis vinifera1607233_atCF414238hypothetical protein LOC100245593-5e-3At5g64850unknown proteinC.G.S.X.
0.031e+032Zea maysZm.12148.1.S1_atBM351623small nuclear ribonucleoprotein Sm D1-3e-8At4g02840small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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