Gene omics information

Query gene ID At5g64460
Gene name -
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g64460836567-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FOPBMS.X.H.G.
0.3846.7At5g46800834724BOU (A BOUT DE SOUFFLE)Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like ProteinS.X.H.G.
0.3846.7At5g47840834835AMK2 (Adenosine monophosphate kinase)F:nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process;C:chloroplast, chloroplast stroma;BOMFPAS.X.H.G.
0.3541.6At1g12410837797CLP2 (CLP PROTEASE PROTEOLYTIC SUBUNIT 2)Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).S.X.H.G.
0.3338.1At4g35450829697AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2)Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.S.X.H.G.
0.3338.1At5g13120831151peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinF:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;OBMFPAVS.X.H.G.
0.3133.8At2g21170816652TIM (TRIOSEPHOSPHATE ISOMERASE)Encodes triosephosphate isomerase.S.X.H.G.
0.2319.3At5g45170834553CbbY protein-relatedF:molecular_function unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;BPOS.X.H.G.
0.114.1At1g20810838672immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinF:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:thylakoid lumen, chloroplast thylakoid lumen, chloroplast;BOPMFS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.699.1GSM268008Col-0, Time 0, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
8.499.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
7.298.8GSM142771AM001_ATH1_ControlGSE6168Comparison of the transcript profile of the auxin resistant axr4 mutant and wild-type Col0
6.898.7GSM133828Walters_A-07-Kruger-ML1_REP1GSE5737Carbohydrate- and redox-regulation of gene expression in a TPT mutant
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.063e-1169At2g17280816234phosphoglycerate/bisphosphoglycerate mutase family proteinF:catalytic activity;P:metabolic process;C:cellular_component unknown;FOPBC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.126e-756Glycine maxGmaAffx.37953.1.A1_atBU548755--3e-7At5g64460-C.G.S.X.
0.165e-548Hordeum vulgareContig5132_atContig5132--2e-4At1g58280-C.G.S.X.
0.133e-654Oryza sativaOs04g0102500CR292872-Phosphoglycerate mutase-like protein3e-6At5g64460-C.G.S.X.
0.106e-446Populus trichocarpaPtpAffx.201971.1.S1_atpmrna3940hypothetical protein-1e-7At1g58280-C.G.S.X.
0.102e-654Triticum aestivumTa.9338.2.S1_x_atCA614952--4e-2At1g58280-C.G.S.X.
0.123e-548Vitis vinifera1608530_atCB971070hypothetical protein LOC100265997-2e-4At5g64460-C.G.S.X.
0.155e-1167Zea maysZm.3850.1.A1_atAI619409phosphoglycerate mutase-like protein-2e-10At5g64460-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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