Gene omics information

Query gene ID At5g64410
Gene name OPT4 (OLIGOPEPTIDE TRANSPORTER 4)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g64410836562OPT4 (OLIGOPEPTIDE TRANSPORTER 4)oligopeptide transporterS.X.H.G.
0.3948.4At1g79590844297SYP52 (SYNTAXIN OF PLANTS 52)Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.S.X.H.G.
0.3338.1At1g09430837466ACLA-3Encodes subunit A of the heteromeric enzyme ATP citrate lyase (ACL). In animals, ACL is encoded by a single gene; ACL in Arabidopsis is composed of two polypeptides, ACLA (encoded by 3 genes) and ACLB (encoded by 2 genes). The holoenzyme has an A(4)B(4)stoichiometry. Expression of both ACLA and ACLB but not of either of the subunits alone results in ACL activity.S.X.H.G.
0.3235.7At2g15570816050thioredoxin M-type 3, chloroplast (TRX-M3)chloroplast protein similar to prokaryotic thioredoxin.S.X.H.G.
0.3133.8At1g59580842248ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2)encodes a mitogen-activated kinase involved in innate immunityS.X.H.G.
0.3133.8At1g32410840134vacuolar protein sorting 55 family protein / VPS55 family proteinF:transporter activity;P:transport;C:vacuole;MFPOS.X.H.G.
0.2624.4At5g49720835035ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.S.X.H.G.
0.2522.6At5g65430836668GRF8 (GENERAL REGULATORY FACTOR 8)member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1S.X.H.G.
0.2420.7At1g70330843369ENT1,AT (EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 1)encodes an adenosine transporter that catalyze a proton-dependent adenosine transport.S.X.H.G.
0.2420.7At4g28770828998-F:molecular_function unknown;P:unknown;C:plasma membrane, vacuole, membrane;POS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
43.899.8GSM226551Slice9JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
25.999.7GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responses
23.399.6GSM226554Slice12JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
22.899.6GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with salt
22.299.6GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
22.099.6GSM226552Slice10JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
21.999.6GSM142850MG001_ATH1_A3-Torres-1N6GSE6176Impact of Type III effectors on plant defense responses
21.599.6GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
21.299.6GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatments
20.899.6GSM131186AtGen_D-19_2-PL_REP2_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.098e-1789At4g27730828887OPT6 (OLIGOPEPTIDE TRANSPORTER 1)oligopeptide transporterC.G.S.X.
0.115e-1273At1g09930837525ATOPT2oligopeptide transporterC.G.S.X.
0.062e-1171At5g55930835691OPT1 (OLIGOPEPTIDE TRANSPORTER 1)oligopeptide transporterC.G.S.X.
0.051e-656At5g53520835434ATOPT8 (ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 8)oligopeptide transporterC.G.S.X.
0.031e-656At4g10770826672OPT7 (OLIGOPEPTIDE TRANSPORTER 7)oligopeptide transporterC.G.S.X.
0.057e-550At4g26590828766OPT5 (OLIGOPEPTIDE TRANSPORTER 5)oligopeptide transporterC.G.S.X.
0.051e-346At5g53510835433ATOPT9 (ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 9)oligopeptide transporterC.G.S.X.
0.023e-138At4g16370827332ATOPT3 (OLIGOPEPTIDE TRANSPORTER)Encodes an oligopeptide transporter involved in metal homeostasis.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.231e-31139Glycine maxGmaAffx.64151.1.S1_atBM887517--2e-32At5g64410OPT4 (OLIGOPEPTIDE TRANSPORTER 4)C.G.S.X.
0.012e+034Hordeum vulgareContig18906_atContig18906--2e+0At3g27416unknown proteinC.G.S.X.
0.099e-654Oryza sativaOs02g0695800AK071310.1-Oligopeptide transporter OPT superfamily protein4e-6At5g64410OPT4 (OLIGOPEPTIDE TRANSPORTER 4)C.G.S.X.
0.405e-62240Populus trichocarpaPtp.8110.1.S1_atCV227916oligopeptide transporter OPT family-2e-62At5g64410OPT4 (OLIGOPEPTIDE TRANSPORTER 4)C.G.S.X.
0.062e-861Triticum aestivumTa.8599.1.A1_atBQ162109--2e-11At4g16370ATOPT3 (OLIGOPEPTIDE TRANSPORTER)C.G.S.X.
0.194e-25115Vitis vinifera1613916_atCF404702hypothetical protein LOC100250922-1e-24At5g64410OPT4 (OLIGOPEPTIDE TRANSPORTER 4)C.G.S.X.
0.012e+034Zea maysZm.12478.1.A1_atCF043347--7e-2At5g40630ubiquitin family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006857The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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