Gene omics information

Query gene ID At5g63650
Gene name SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At5g63650836485SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.S.X.H.G.
0.5773.8At4g11610826766C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.5570.6At2g34020817963calcium ion bindingF:calcium ion binding;P:biological_process unknown;C:unknown;POMBFS.X.H.G.
0.4050.8At3g14370820658WAG2The WAG2 and its homolog, WAG1 each encodes protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.S.X.H.G.
0.103.4At4g32460829381-F:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
109.499.9E-MEXP-1468-raw-cel-1591138688
103.699.9GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
97.599.9E-MEXP-1468-raw-cel-1591138655
89.099.9E-MEXP-1468-raw-cel-1591138853
82.699.9GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
73.699.9GSM133118RIKEN-YAMAUCHI1BGSE5687AtGenExpress: Different temperature treatment of seeds
70.999.9GSM184907Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
70.599.9E-MEXP-1468-raw-cel-1591138754
63.699.8E-MEXP-1468-raw-cel-1591138886
60.199.8E-MEXP-1784-raw-cel-1661573117
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.800938At5g08590830760SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1)Encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily.C.G.S.X.
0.532e-71270At1g10940837637SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4)Encodes a plant protein kinase similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Kinase activity of its homolog in tobacco is induced by hyperosmotic condition within 1 minute.C.G.S.X.
0.537e-65248At1g60940842385SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10)encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.C.G.S.X.
0.301e-26121At3g50500824214SNRK2.2 (SNF1-RELATED PROTEIN KINASE 2.2)encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.C.G.S.X.
0.427e-1995At2g23030816833SNRK2.9 (SNF1-RELATED PROTEIN KINASE 2.9)encodes a member of SNF1-related protein kinases (SnRK2)C.G.S.X.
0.254e-1789At4g40010830162SNRK2.7 (SNF1-RELATED PROTEIN KINASE 2.7)encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.C.G.S.X.
0.192e-1377At5g66880836822SNRK2.3 (SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3)encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.491e-51204Glycine maxGmaAffx.92514.1.S1_s_atCF808239--1e-80At1g10940SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4)C.G.S.X.
0.282e-1169Hordeum vulgareContig7433_atContig7433--5e-11At5g63650SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)C.G.S.X.
0.261e-1275Oryza sativaOs03g0390200AB125302.1-Protein kinase 31e-12At5g63650SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)C.G.S.X.
0.602e-78293Populus trichocarpaPtpAffx.217210.1.S1_atpmrna32384hypothetical protein-6e-155At1g10940SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4)C.G.S.X.
0.263e-1273Triticum aestivumTa.24918.1.S1_atBJ276770--2e-48At1g10940SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4)C.G.S.X.
0.325e-54210Vitis vinifera1609336_s_atCF207826serine/threonine kinase GDBrPK-like /// hypothetical protein LOC100262674-2e-26At4g40010SNRK2.7 (SNF1-RELATED PROTEIN KINASE 2.7)C.G.S.X.
0.252e-26119Zea maysZm.13619.1.A1_atCF630917hypothetical protein LOC100192497 /// serine/threonine-protein kinase SAPK2 /// serine/threonine-protein kinase SAPK2-1e-30At4g33950OST1 (OPEN STOMATA 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006970A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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