Gene omics information

Query gene ID At5g63140
Gene name ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2930.3At5g63140836435ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPOS.X.H.G.
0.6781.6At5g45670834606GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
0.5773.8At1g72970843628HTH (HOTHEAD)Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.S.X.H.G.
0.2014.4At4g39330830088CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9)F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:apoplast;BOPFMAVS.X.H.G.
0.2014.4At5g13400831181proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PBMOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.299.8GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
30.399.7GSM284387Arabidopsis GSUS4bGSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
29.499.7GSM147964WT Globular Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
27.299.7GSM147963WT Globular Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
24.599.6GSM147965lec1-1 Globular Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
23.499.6GSM10442WT Ovule 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
22.899.6GSM10445WT 24-Hr Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
22.299.6GSM10446WT 24-Hr Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
21.399.6GSM10477lec1-1 24-Hr Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
21.299.6GSM147966lec1-1 Globular Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.064e-550At5g57140835820PAP28 (PURPLE ACID PHOSPHATASE 28)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPOC.G.S.X.
0.096e-446At2g46880819301PAP14 (PURPLE ACID PHOSPHATASE 14)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPOC.G.S.X.
0.026e-136At4g22890828388PGR5-LIKE AEncodes PGRL1A, a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).C.G.S.X.
0.026e-136At1g68340843163unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-138Glycine maxGmaAffx.89723.1.S1_x_atCK606265--1e-1At5g63140ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)C.G.S.X.
0.042e-240Hordeum vulgareContig17038_atContig17038--3e-2At5g63140ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)C.G.S.X.
0.115e-654Oryza sativaOs09g0533300AK073741.1-Phosphoesterase At2g46880 family protein3e-6At5g63140ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)C.G.S.X.
0.162e-448Populus trichocarpaPtpAffx.3736.1.S1_atCV250453hypothetical protein-2e-4At5g63140ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)C.G.S.X.
0.043e-654Triticum aestivumTa.10622.1.A1_atBQ166133--9e-7At5g63140ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)C.G.S.X.
0.032e-136Vitis vinifera1620925_atCF209359hypothetical protein LOC100264419-2e-1Atmg01020-C.G.S.X.
0.073e-756Zea maysZm.9854.2.A1_atCA452719--4e-7At5g63140ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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