Gene omics information

Query gene ID At5g62750
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8894.0At5g62750836396unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAS.X.H.G.
0.7486.1At1g24520839067BCP1Male fertility gene acting on tapetum and microsporeS.X.H.G.
0.7184.2At3g26860822302-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6982.9At5g47000834746peroxidase, putativeF:xylan 1,4-beta-xylosidase activity, peroxidase activity;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
0.6882.2At3g04700819628unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6781.6At1g47280841131unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6781.6At2g24450816981FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR)F:molecular_function unknown;P:N-terminal protein myristoylation;C:anchored to membrane;PBMOFVAS.X.H.G.
0.6781.6At5g15600831412SP1L4 (SPIRAL1-LIKE4)SPIRAL1-LIKE4 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion.S.X.H.G.
0.6781.6At4g02250827589invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6579.6At4g27580828867unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, cell wall;OBMFPVAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
184.7100.0GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
177.6100.0GSM142739DH001_ATH1_A6-TCP2GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
171.9100.0GSM154503Arabidopsis desiccated mature pollen grains rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
168.0100.0GSM154505Arabidopsis hydrated pollen grains rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-136At5g43020834317leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.022e-136At5g49340834994unknown proteinF:unknown;P:biological_process unknown;C:unknown;PMOC.G.S.X.
0.017e-134At5g39980833995pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:chloroplast;POMFBAC.G.S.X.
0.037e-134At5g57770835885-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBC.G.S.X.
0.017e-134At4g20850827833TPP2 (TRIPEPTIDYL PEPTIDASE II)Tripeptidyl Peptidase II. Ser protease that assembles into a large oligomeric complex containing two proteins of 153 and 142 kD that are derived from a single TPP2 gene, with the smaller version missing part of the C-terminal end. Not essential, based on the lack of phenotype of a T-DNA disruption mutant.C.G.S.X.
0.037e-134At4g36590829811MADS-box protein (AGL40)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOC.G.S.X.
0.037e-134At2g23640816896reticulon family protein (RTNLB13)F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;MPOC.G.S.X.
0.027e-134At1g48620841283HON5 (High Mobility Group Family A 5)This gene is predicted to encodes a histone H1/H5 family member. A plant line expressing an RNAi construct targeted against HON5 shows a reduced level of agrobacterium-mediated root transformation.C.G.S.X.
0.053e+032Atmg00450--hypothetical proteinC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Glycine maxGma.13111.2.S1_atBG882577--5e-5At1g49410TOM6 (translocase of the outer mitochondrial membrane 6)C.G.S.X.
0.041e+032Hordeum vulgareEBem09_SQ004_I01_atEBem09_SQ004_I01--6e-1At3g32100unknown proteinC.G.S.X.
0.031e+034Oryza sativaOs02g03059009636.m04294--4e-1At1g30880unknown proteinC.G.S.X.
0.031e+034Populus trichocarpaPtpAffx.63488.3.A1_atCV273768--3e-17At4g24240WRKY7C.G.S.X.
0.043e+032Triticum aestivumTa.9931.1.S1_atBJ234937--4e+0At5g62750unknown proteinC.G.S.X.
0.043e+030Vitis vinifera1618101_atCF405874hypothetical protein LOC100259048-9e-2At3g4459060S acidic ribosomal protein P2 (RPP2D)C.G.S.X.
0.045e+030Zea maysZmAffx.836.1.A1_atAI770581--2e-1At3g24350SYP32 (SYNTAXIN OF PLANTS 32)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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