Gene omics information

Query gene ID At5g62340
Gene name invertase/pectin methylesterase inhibitor family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5773.8At5g62340836355invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7586.9At5g48110834863terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PMOS.X.H.G.
0.5065.3At2g23050816835NPY4 (NAKED PINS IN YUC MUTANTS 4)A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.S.X.H.G.
0.4659.8At4g29690829090type I phosphodiesterase/nucleotide pyrophosphatase family proteinF:hydrolase activity, catalytic activity;P:metabolic process, nucleotide metabolic process;C:endomembrane system;MBOFPAVS.X.H.G.
0.4457.2At2g41800818779-F:molecular_function unknown;P:biological_process unknown;C:cell wall, plant-type cell wall;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
114.899.9GSM226531L1SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
113.299.9GSM252689Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activity
110.299.9GSM252687Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activity
94.599.9GSM252685Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activity
90.599.9GSM252688Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activity
85.699.9GSM252686Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activity
85.199.9GSM226545Slice3JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
83.799.9GSM226543Slice1JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
81.299.9GSM266664Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
74.199.9GSM184891Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.762e-95349At5g62330836354-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.138e-238At3g47380823892invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.021e+034At5g12440831119nucleic acid binding / nucleotide binding / zinc ion bindingF:nucleotide binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;PMOC.G.S.X.
0.021e+034At4g30910829215cytosol aminopeptidase family proteinF:manganese ion binding, metalloexopeptidase activity, aminopeptidase activity;P:proteolysis, protein metabolic process;C:chloroplast;OBMPFAC.G.S.X.
0.035e+032At5g47920834843unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.045e+032At5g46770834720unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.035e+032At5g66400836772RAB18 (RESPONSIVE TO ABA 18)Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.C.G.S.X.
0.065e+032At5g62350836356invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:response to salt stress;C:endomembrane system;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxPsAffx.C26000001_atPsAffx.C26000001--2e+0At5g62330-C.G.S.X.
0.032e+032Hordeum vulgareHV12N24u_s_atHV12N24u--4e+0At5g18180Gar1 RNA-binding region family proteinC.G.S.X.
0.026e-136Oryza sativaOs05g0388400CA762987-Hypothetical protein3e-2At3g21070NADK1 (NAD KINASE 1)C.G.S.X.
0.047e+032Populus trichocarpaPtpAffx.212743.1.S1_atpmrna24926hypothetical protein-2e+0At2g38130ATMAK3C.G.S.X.
0.045e+032Triticum aestivumTa.19307.1.S1_atCA649973--2e+0At4g38410dehydrin, putativeC.G.S.X.
0.034e-134Vitis vinifera1611102_atCF603491hypothetical protein LOC100259129-4e-22At3g58730vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)C.G.S.X.
0.032e+032Zea maysZmAffx.603.1.A1_atAI715031--1e+1At5g05430-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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