Gene omics information

Query gene ID At5g62280
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4355.3At5g62280836349unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5065.3At5g02760831234protein phosphatase 2C family protein / PP2C family proteinF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBAVS.X.H.G.
0.4050.8At2g18010816313auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POS.X.H.G.
0.4050.8At4g34770829629auxin-responsive family proteinF:unknown;P:response to auxin stimulus;C:unknown;POS.X.H.G.
0.3338.1At4g32280829361IAA29 (INDOLE-3-ACETIC ACID INDUCIBLE 29)Auxin inducible protein.S.X.H.G.
0.2726.2At4g14130827051XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)xyloglucan endotransglycosylase-related protein (XTR7)S.X.H.G.
0.2726.2At5g57240835830ORP4C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4C)F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOPS.X.H.G.
0.2217.5At4g16515827350unknown proteinF:molecular_function unknown;P:unknown;C:endomembrane system;PS.X.H.G.
0.2014.4At1g67910843119unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
85.699.9E-NASC-78-raw-cel-1463195219
83.199.9E-NASC-78-raw-cel-1463195187
68.199.9E-NASC-78-raw-cel-1463195235
60.799.8E-MEXP-1299-raw-cel-1519903848
54.399.8E-MEXP-715-raw-cel-1121836361
46.999.8E-MEXP-1299-raw-cel-1519903746
46.499.8E-MEXP-1468-raw-cel-1591138919
44.699.8GSM282699Col_BRZ_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlings
43.699.8E-MEXP-1468-raw-cel-1591138985
42.899.8E-MEXP-1299-raw-cel-1519902780
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.032e-240At1g12320837786unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.029e-238At5g10820830949integral membrane transporter family proteinF:transporter activity;P:transport;C:membrane;OPBMFC.G.S.X.
0.019e-238At4g36180829775leucine-rich repeat family proteinF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.029e-238At1g01900839318SBTI1.1Encodes AtSBT1.1, a subtilisin-like serine protease. Cleaves the phytosulfokine AtPSK4, a growth promoting peptide.C.G.S.X.
0.013e-136At4g03440827920ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPBFVAC.G.S.X.
0.013e-136At4g03460827916ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.013e-136At3g12560820436TRFL9 (TRF-LIKE 9)Encodes a telomeric DNA-binding protein.C.G.S.X.
0.013e-136At2g01730814702ATCPSF73-II (cleavage and polyadenylation specificity factor 73 kDa subunit-II)a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryoC.G.S.X.
0.011e+034At5g08600830761U3 ribonucleoprotein (Utp) family proteinF:molecular_function unknown;P:rRNA processing;C:small-subunit processome;OMFBPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-240Glycine maxGmaAffx.62247.1.S1_atBM519738--2e-2At5g62280unknown proteinC.G.S.X.
0.033e+032Hordeum vulgareHVSMEc0014G08r2_atHVSMEc0014G08r2--8e-1At3g44280unknown proteinC.G.S.X.
0.047e-136Oryza sativaOsAffx.6184.1.S1_at---0C.G.S.X.
0.043e-550Populus trichocarpaPtpAffx.163665.1.S1_s_atBU813254hypothetical protein-3e-5At5g62280unknown proteinC.G.S.X.
0.036e+032Triticum aestivumTaAffx.26433.1.S1_atCA689004--3e+0At5g62280unknown proteinC.G.S.X.
0.034e-134Vitis vinifera1616654_x_atCF202840.1--2e+1At4g01430nodulin MtN21 family proteinC.G.S.X.
0.026e-134Zea maysZm.17625.1.A1_atCF631845--4e-23At1g10200WLIM1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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