Gene omics information

Query gene ID At5g61660
Gene name glycine-rich protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g61660836288glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAS.X.H.G.
0.5773.8At5g08410830739FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2)F:ferredoxin:thioredoxin reductase activity, lipoate synthase activity, catalytic activity, ferredoxin reductase activity;P:photosynthesis, light reaction, lipoate biosynthetic process, photosynthesis;C:chloroplast;BPOS.X.H.G.
0.5773.8At1g19740838563ATP-dependent protease La (LON) domain-containing proteinF:ATP-dependent peptidase activity;P:ATP-dependent proteolysis;C:chloroplast;OBMPFS.X.H.G.
0.5673.0At5g19250832045unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, anchored to membrane;PS.X.H.G.
0.5673.0At1g06460837158ACD32.1 (ALPHA-CRYSTALLIN DOMAIN 32.1)ACD32.1 encodes an alpha-crystallin domain containing protein with homology to small heat shock proteins.S.X.H.G.
0.5570.6At5g65840836713-F:molecular_function unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;PMBOFS.X.H.G.
0.5469.5At3g10520820216AHB2 (ARABIDOPSIS HAEMOGLOBIN 2)class 2 non-symbiotic hemoglobinS.X.H.G.
0.5469.5At1g21065838701unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;BOAFPMS.X.H.G.
0.5267.4At1g76020843933-F:unknown;P:biological_process unknown;C:cell wall, vacuole;BPOMFS.X.H.G.
0.5166.3At4g34950829647nodulin family proteinF:unknown;P:unknown;C:unknown;OBPFAMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
130.499.9E-MEXP-509-raw-cel-829148703
36.199.7E-TABM-62-raw-cel-720981046
25.899.7E-TABM-62-raw-cel-720981923
25.199.6GSM131528ATGE_19_AGSE5630AtGenExpress: Developmental series (leaves)
24.599.6E-TABM-62-raw-cel-720980002
18.999.5GSM131530ATGE_19_CGSE5630AtGenExpress: Developmental series (leaves)
18.299.5GSM131529ATGE_19_BGSE5630AtGenExpress: Developmental series (leaves)
17.299.5E-TABM-61-raw-cel-683343600
16.999.5GSM133033CT182-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
16.399.5GSM128712Thorlby_1-1_cold-acclimated_REP3_ATH1GSE5524Gene Expression During Recovery from Freezing
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.018e-134At1g02530839282PGP12 (P-GLYCOPROTEIN 12)F:ATPase activity, coupled to transmembrane movement of substances;P:response to cyclopentenone;C:integral to membrane;BOMAFPVC.G.S.X.
0.023e+032At5g59740836095UDP-galactose/UDP-glucose transporter-relatedF:galactose transmembrane transporter activity;P:unknown;C:unknown;MFPOBC.G.S.X.
0.013e+032At5g56360835736calmodulin-binding proteinF:calmodulin binding;P:unknown;C:endomembrane system;MOBFPVAC.G.S.X.
0.013e+032At5g13950831243unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBC.G.S.X.
0.023e+032At4g36970829851remorin family proteinF:DNA binding;P:unknown;C:plasma membrane, chloroplast;POMFBC.G.S.X.
0.013e+032At2g46920819306POL (poltergeist)Pol mutations are recessive, partial suppressors of meristem defects in strong clv1 and clv3 mutants, and nearly complete suppressors of weak clv1 mutants. Single mutants appear normal. Acts downstream of the CLV signaling pathway in meristem development and is required together with PLL1 for stem-cell maintenance through the regulation of WUS.C.G.S.X.
0.013e+032At1g48920841314ATNUC-L1Encodes the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants.C.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-344Glycine maxGma.17558.1.S1_atBG508180--8e-4At5g61660glycine-rich proteinC.G.S.X.
0.036e+030Hordeum vulgareContig6817_atContig6817--2e-2At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
0.071e-138Oryza sativaOs02g02104009630.m01076--2e-2At5g61660glycine-rich proteinC.G.S.X.
0.071e+034Populus trichocarpaPtpAffx.215318.1.S1_s_atpmrna29438hypothetical protein-1e+0At5g61660glycine-rich proteinC.G.S.X.
0.051e+130Triticum aestivumTaAffx.93474.1.S1_atBJ209155--1e+0At5g25540CID6 (CTC-Interacting Domain 6)C.G.S.X.
0.049e-132Vitis vinifera1617210_atCB976951--2e-1At1g70030paired amphipathic helix repeat-containing proteinC.G.S.X.
0.031e+032Zea maysZm.443.1.S1_atAF031083.2aluminum-induced protein-1e-1At5g46730glycine-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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