Gene omics information

Query gene ID At5g61600
Gene name ethylene-responsive element-binding family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g61600836281ethylene-responsive element-binding family proteinencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
0.8190.4At5g45340834570CYP707A3Encodes a protein with ABA 8'-hydroxylase activity; involved in ABA catabolism. Mutant analyses show that disruption in the gene results in more drought tolerance whereas overexpression results in increased transpiration rate and reduced drought tolerance. Gene involved in postgermination growth. Plant P450 CYP707A3, ABA 8'-hydroxylase, binds enantioselectively (+)-ABA but not (-)-ABA, whereas the enzyme binds both enantiomers of AHI1 (a structural ABA analogue used as ABA 8'-hydroxylase competitive inhibitor).S.X.H.G.
0.7184.2At1g28370839733ERF11 (ERF DOMAIN PROTEIN 11)encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.S.X.H.G.
0.6680.1At3g44260823551CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:response to biotic stimulus, response to wounding, RNA modification;C:nucleus;MPOFS.X.H.G.
0.6579.6At3g50060824168MYB77Encodes a member of the R2R3 transcription factor gene family. Expressed in response to potassium deprivation and auxin. Involved in lateral root development. Interacts with ARF7 and regulates the expression of some auxin responsive genes.S.X.H.G.
0.6478.9At5g04340830313ZAT6 (ZINC FINGER OF ARABIDOPSIS THALIANA 6)putative c2h2 zinc finger transcription factor mRNA,S.X.H.G.
0.6378.1At4g27280828836calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:unknown;MPOFS.X.H.G.
0.6378.1At5g47230834770ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
0.6075.7At1g27730839666STZ (salt tolerance zinc finger)Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.S.X.H.G.
0.5673.0At1g18740838456unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
212.9100.0E-MEXP-807-raw-cel-1173273196
202.7100.0E-MEXP-807-raw-cel-1173273060
169.1100.0E-MEXP-807-raw-cel-1173273088
154.199.9E-MEXP-807-raw-cel-1173273170
123.399.9E-MEXP-807-raw-cel-1173273116
109.699.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
105.199.9E-MEXP-807-raw-cel-1173273223
99.999.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
97.699.9E-MEXP-807-raw-cel-1173273144
74.799.9GSM142648MC002_ATH1_A9.2-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.062e-963At4g11140826715CRF1 (CYTOKININ RESPONSE FACTOR 1)encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Also named as CRF1 (cytokinin response factor 1).C.G.S.X.
0.116e-961At2g44840819093ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.061e-757At3g61630825336CRF6 (CYTOKININ RESPONSE FACTOR 6)CRF6 encodes one of the six cytokinin response factors. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.C.G.S.X.
0.124e-756At5g47230834770ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.069e-548At4g17500827464ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.119e-548At2g33710817936AP2 domain-containing transcription factor family proteinencodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.C.G.S.X.
0.074e-446At5g51190835193AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.064e-446At5g47220834768ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box–dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.C.G.S.X.
0.071e-344At2g46310819239CRF5 (CYTOKININ RESPONSE FACTOR 5)CRF5 encodes one of the six cytokinin response factors. It is transcriptionally upregulated in response to cytokinin. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.085e-136Glycine maxGma.15943.2.S1_atBE057404--2e-5At2g33710AP2 domain-containing transcription factor family proteinC.G.S.X.
0.032e-136Hordeum vulgareContig17873_atContig17873--4e-1At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
0.037e-136Oryza sativaOsAffx.12330.1.S1_at---0C.G.S.X.
0.121e-757Populus trichocarpaPtpAffx.200313.1.S1_atpmrna620AP2/ERF domain-containing transcription factor-7e-10At5g51190AP2 domain-containing transcription factor, putativeC.G.S.X.
0.042e+034Triticum aestivumTaAffx.86587.1.S1_atCA605154--7e-2At5g47170unknown proteinC.G.S.X.
0.063e-238Vitis vinifera1619311_atCB970517hypothetical LOC100264074-3e-5At5g13910LEP (LEAFY PETIOLE)C.G.S.X.
0.076e-134Zea maysZm.8626.1.A1_atBM348921hypothetical protein LOC100274398-1e+0At5g61600ethylene-responsive element-binding family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0050832Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage