CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g61430

Gene name ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.59 74.7 At5g61430 836264 ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P S.X. H.G.
0.87 93.5 At3g52810 824447 PAP21 (PURPLE ACID PHOSPHATASE 21) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBMOFA S.X. H.G.
0.85 92.4 At1g23240 838933 caleosin-related family protein F:lipase activity, calcium ion binding;P:unknown;C:extracellular region;PFO S.X. H.G.
0.85 92.4 At5g07540 830647 GRP16 (GLYCINE-RICH PROTEIN 16) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12). S.X. H.G.
0.83 91.4 At1g30350 839915 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO S.X. H.G.
0.80 89.8 At1g23590 838969 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.78 88.6 At5g07510 830644 GRP14 encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers. S.X. H.G.
0.77 88.0 At1g23250 838934 calcium ion binding F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFO S.X. H.G.
0.77 88.0 At5g07520 830645 GRP18 (GLYCINE-RICH PROTEIN 18) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12). S.X. H.G.
0.74 86.1 At1g23520 838960 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
327.9 100.0 GSM106833 opr3_JA_0.5 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
237.6 100.0 GSM106934 opr3_OPDA_8 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
229.8 100.0 GSM106909 opr3-JA_2 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
204.4 100.0 GSM106919 opr3_OPDA_0.5 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
196.9 100.0 GSM106827 opr3_0 hr_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
169.2 100.0 GSM106922 opr3_OPDA_2 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
169.1 100.0 GSM106825 opr3_0 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
151.1 99.9 GSM106920 opr3_OPDA_0.5 hr_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
146.4 99.9 GSM106908 opr3_JA_0.5 hr_Rep3 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
128.5 99.9 GSM106911 opr2_JA_2 hrs_Rep3 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.71 2e-154 545 At5g07680 830661 ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P C.G. S.X.
0.33 5e-38 159 At5g39610 833957 ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6) Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510. C.G. S.X.
0.21 2e-28 127 At3g04060 819561 anac046 (Arabidopsis NAC domain containing protein 46) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P C.G. S.X.
0.16 3e-27 123 At3g18400 821369 anac058 (Arabidopsis NAC domain containing protein 58) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO C.G. S.X.
0.29 7e-25 115 At3g29035 822547 ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 3) Encodes a protein with transcription factor activity. Note: this protein (AT3G29035) on occasion has also been referred to as AtNAC3, not to be confused with the AtNAC3 found at locus AT3G15500. C.G. S.X.
0.11 2e-12 73 At5g18270 831945 ANAC087 F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P C.G. S.X.
0.11 2e-12 73 At3g15170 820748 CUC1 (CUP-SHAPED COTYLEDON1) Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). Cuc mutant was first recognized at the heart stage, where embryos lacking two distinct bulges of cotyledonary primordia were observed. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 2e-29 131 Glycine max Gma.8946.1.S1_at BQ453813 NAC domain protein - 2e-21 At5g07680 ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80) C.G. S.X.
0.11 4e-3 42 Hordeum vulgare Contig9284_at Contig9284 - - 3e-18 At3g04060 anac046 (Arabidopsis NAC domain containing protein 46) C.G. S.X.
0.09 3e-7 57 Oryza sativa Os09g0497900 AK102511.1 - No apical meristem (NAM) protein domain containingprotein 1e-21 At3g18400 anac058 (Arabidopsis NAC domain containing protein 58) C.G. S.X.
0.38 2e-56 220 Populus trichocarpa PtpAffx.210237.1.S1_at pmrna20155 NAC domain protein, IPR003441 - 1e-41 At5g07680 ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80) C.G. S.X.
0.08 8e-3 42 Triticum aestivum TaAffx.117376.1.S1_at BQ605728 - - 1e-15 At3g04060 anac046 (Arabidopsis NAC domain containing protein 46) C.G. S.X.
0.06 4e-5 48 Vitis vinifera 1620507_at CB979490 hypothetical protein LOC100242836 - 1e-19 At5g04410 NAC2 C.G. S.X.
0.04 1e-2 40 Zea mays Zm.5914.1.A1_at CA402103 nac4 protein - 4e-12 At3g04060 anac046 (Arabidopsis NAC domain containing protein 46) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0007275 The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
L GO:0045449 Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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