Gene omics information

Query gene ID At5g61090
Gene name nucleic acid binding
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6680.1At5g61090836230nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:chloroplast;MBOPFVAS.X.H.G.
0.7989.1At5g62160836336AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR)member of Fe(II) transporter isolog familyS.X.H.G.
0.7586.9At3g58860825055F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7284.8At1g10890837632unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPVAS.X.H.G.
0.7184.2At2g06960815265oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;PBOFMS.X.H.G.
0.7083.5At4g17130---S.X.H.G.
0.6982.9At2g24255816960-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6882.2At4g17580827475Bax inhibitor-1 family protein / BI-1 family proteinF:molecular_function unknown;P:negative regulation of apoptosis, regulation of apoptosis, apoptosis;C:integral to membrane;BMOFPVS.X.H.G.
0.6882.2At5g46310834674WRKY family transcription factorF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:unknown;FPS.X.H.G.
0.6781.6At2g35460818111harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinF:unknown;P:unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
443.4100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
239.2100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
217.8100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
216.5100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
191.8100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
175.1100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
165.7100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
156.599.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
149.799.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
147.999.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.072e-344At5g61120836233-F:unknown;P:biological_process unknown;C:unknown;PMOC.G.S.X.
0.015e-136At5g59730836094ATEXO70H7 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.C.G.S.X.
0.025e-136At5g38920833884nucleic acid binding / ribonuclease HF:ribonuclease H activity, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.015e-136At4g01180828058XH/XS domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MOBFPAVC.G.S.X.
0.015e-136At4g29000829021tesmin/TSO1-like CXC domain-containing proteinF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;OMPFC.G.S.X.
0.012e+034At5g13150831154ATEXO70C1 (exocyst subunit EXO70 family protein C1)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.C.G.S.X.
0.012e+034At5g16630831525RAD4F:damaged DNA binding;P:nucleotide-excision repair;C:nucleus, chloroplast;MFOPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Glycine maxGmaAffx.10780.1.S1_atBU964855--9e-1At5g61090nucleic acid bindingC.G.S.X.
0.024e+032Hordeum vulgareContig9830_s_atContig9830--4e+0At4g09970unknown proteinC.G.S.X.
0.024e+034Oryza sativaOs.54408.1.S1_at---0C.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.209695.1.S1_atpmrna19135hypothetical protein-9e-7At1g60690aldo/keto reductase family proteinC.G.S.X.
0.041e-138Triticum aestivumTa.8643.1.S1_atCA610845--5e-2At2g22807-C.G.S.X.
0.026e-134Vitis vinifera1617435_atCF604886hypothetical protein LOC100248075-2e-5At3g13990unknown proteinC.G.S.X.
0.024e+032Zea maysZm.5768.1.A1_atAI649523hypothetical protein LOC100279614-6e+0At3g63050unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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